Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL54Q6P161 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL54Q6P161 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL54Q6P161 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
MRPL54Q6P161 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL54Q6P161 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.3□□□□□ -0.6
MRPL54Q6P161 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL54Q6P161 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL54Q6P161 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL54Q6P161 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
MRPL54Q6P161 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
MRPL54Q6P161 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
MRPL54Q6P161 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 MOK-208ENST00000519058 917 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 AC022497.1-201ENST00000624916 3691 ntBASIC11.29□□□□□ -0.6
MRPL54Q6P161 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 AC020910.6-201ENST00000623084 1459 ntBASIC11.29□□□□□ -0.6
MRPL54Q6P161 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
MRPL54Q6P161 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MRPL54Q6P161 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms