Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 PCDHB18P-202ENST00000526308 3197 ntBASIC13.62□□□□□ -0.23
RBM48Q5RL73 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 TFAMP1-201ENST00000412727 736 ntBASIC13.62□□□□□ -0.23
RBM48Q5RL73 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 AC074386.1-202ENST00000463561 864 ntBASIC13.62□□□□□ -0.23
RBM48Q5RL73 KRT18P43-201ENST00000469825 1281 ntBASIC13.62□□□□□ -0.23
RBM48Q5RL73 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 AC004066.1-201ENST00000502488 802 ntBASIC13.62□□□□□ -0.23
RBM48Q5RL73 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RBM48Q5RL73 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.62□□□□□ -0.23
RBM48Q5RL73 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
RBM48Q5RL73 AC079781.3-201ENST00000449110 356 ntBASIC13.61□□□□□ -0.23
RBM48Q5RL73 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.61□□□□□ -0.23
RBM48Q5RL73 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms