Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 BCYRN1-201ENST00000418539 200 ntBASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 AC011742.3-201ENST00000439053 820 ntBASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 AC104073.2-201ENST00000453737 312 ntBASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 MARK2P5-201ENST00000507649 634 ntBASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 AC022217.1-201ENST00000521069 738 ntBASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 AC103988.2-201ENST00000561804 725 ntBASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 AC005962.1-201ENST00000584100 773 ntBASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DCAF4L1Q3SXM0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DCAF4L1Q3SXM0 KRT8P28-201ENST00000433288 1390 ntBASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 VDAC1P1-201ENST00000439229 848 ntBASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 HLA-J-204ENST00000495278 958 ntBASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 HIST2H2BC-201ENST00000498492 580 ntBASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.01■□□□□ 0.15
DCAF4L1Q3SXM0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 MBLAC2-202ENST00000514906 1936 ntBASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 RBM8B-201ENST00000555532 525 ntBASIC16■□□□□ 0.15
DCAF4L1Q3SXM0 AL160314.3-201ENST00000556041 767 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms