Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 TREML5P-201ENST00000421694 576 ntBASIC13.9□□□□□ -0.18
CD47Q08722 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.9□□□□□ -0.18
CD47Q08722 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.9□□□□□ -0.18
CD47Q08722 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.9□□□□□ -0.18
CD47Q08722 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.9□□□□□ -0.18
CD47Q08722 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CD47Q08722 AC010336.2-201ENST00000564226 506 ntBASIC13.9□□□□□ -0.18
CD47Q08722 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.9□□□□□ -0.18
CD47Q08722 AC015911.4-201ENST00000588022 1070 ntBASIC13.9□□□□□ -0.18
CD47Q08722 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.9□□□□□ -0.18
CD47Q08722 AC074044.1-201ENST00000609673 707 ntBASIC13.9□□□□□ -0.18
CD47Q08722 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.9□□□□□ -0.18
CD47Q08722 AL109936.8-201ENST00000641772 604 ntBASIC13.9□□□□□ -0.18
CD47Q08722 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 AL591122.2-201ENST00000624125 1853 ntBASIC13.9□□□□□ -0.18
CD47Q08722 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 AC015909.5-201ENST00000624336 2266 ntBASIC13.9□□□□□ -0.18
CD47Q08722 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CD47Q08722 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CD47Q08722 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.9□□□□□ -0.19
CD47Q08722 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.9□□□□□ -0.19
CD47Q08722 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.9□□□□□ -0.19
CD47Q08722 KRT18P28-201ENST00000453838 1332 ntBASIC13.9□□□□□ -0.19
CD47Q08722 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CD47Q08722 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.89□□□□□ -0.19
CD47Q08722 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 AC023794.5-201ENST00000564380 2157 ntBASIC13.89□□□□□ -0.19
CD47Q08722 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CD47Q08722 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 Z82170.1-201ENST00000625081 3192 ntBASIC13.89□□□□□ -0.19
CD47Q08722 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.89□□□□□ -0.19
CD47Q08722 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 MIR943-201ENST00000401286 94 ntBASIC13.89□□□□□ -0.19
CD47Q08722 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.89□□□□□ -0.19
CD47Q08722 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.89□□□□□ -0.19
CD47Q08722 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.89□□□□□ -0.19
CD47Q08722 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.89□□□□□ -0.19
CD47Q08722 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.89□□□□□ -0.19
CD47Q08722 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.89□□□□□ -0.19
CD47Q08722 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.89□□□□□ -0.19
CD47Q08722 AL158211.3-201ENST00000607385 239 ntBASIC13.89□□□□□ -0.19
CD47Q08722 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CD47Q08722 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.89□□□□□ -0.19
CD47Q08722 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CD47Q08722 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CD47Q08722 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CD47Q08722 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.89□□□□□ -0.19
CD47Q08722 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.89□□□□□ -0.19
CD47Q08722 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD47Q08722 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.89□□□□□ -0.19
CD47Q08722 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.88□□□□□ -0.19
CD47Q08722 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.88□□□□□ -0.19
CD47Q08722 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.88□□□□□ -0.19
CD47Q08722 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD47Q08722 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.88□□□□□ -0.19
CD47Q08722 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms