Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 AC100757.3-201ENST00000622361 1406 ntBASIC11.51□□□□□ -0.57
HIST1H1AQ02539 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
HIST1H1AQ02539 Z82170.1-201ENST00000625081 3192 ntBASIC11.51□□□□□ -0.57
HIST1H1AQ02539 REXO1L4P-201ENST00000605109 1937 ntBASIC11.5□□□□□ -0.57
HIST1H1AQ02539 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 PPT1-213ENST00000641319 2388 ntBASIC11.5□□□□□ -0.57
HIST1H1AQ02539 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 METTL21AP1-201ENST00000438852 635 ntBASIC11.5□□□□□ -0.57
HIST1H1AQ02539 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 AC097493.3-201ENST00000509725 367 ntBASIC11.5□□□□□ -0.57
HIST1H1AQ02539 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 AC015911.4-201ENST00000588022 1070 ntBASIC11.5□□□□□ -0.57
HIST1H1AQ02539 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 AC023511.2-201ENST00000618803 211 ntBASIC11.5□□□□□ -0.57
HIST1H1AQ02539 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.5□□□□□ -0.57
HIST1H1AQ02539 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.49□□□□□ -0.57
HIST1H1AQ02539 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.49□□□□□ -0.57
HIST1H1AQ02539 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
HIST1H1AQ02539 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.49□□□□□ -0.57
HIST1H1AQ02539 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HIST1H1AQ02539 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.49□□□□□ -0.57
HIST1H1AQ02539 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC11.49□□□□□ -0.57
HIST1H1AQ02539 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HIST1H1AQ02539 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.49□□□□□ -0.57
HIST1H1AQ02539 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
HIST1H1AQ02539 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.49□□□□□ -0.57
HIST1H1AQ02539 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms