Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.27□□□□□ -0.28
EFNB1P98172 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EFNB1P98172 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EFNB1P98172 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
EFNB1P98172 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
EFNB1P98172 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
EFNB1P98172 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
EFNB1P98172 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
EFNB1P98172 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.27□□□□□ -0.29
EFNB1P98172 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.27□□□□□ -0.29
EFNB1P98172 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.27□□□□□ -0.29
EFNB1P98172 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 AC004890.2-204ENST00000481968 304 ntBASIC13.27□□□□□ -0.29
EFNB1P98172 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 AC067863.1-201ENST00000494933 530 ntBASIC13.27□□□□□ -0.29
EFNB1P98172 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.27□□□□□ -0.29
EFNB1P98172 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.27□□□□□ -0.29
EFNB1P98172 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.27□□□□□ -0.29
EFNB1P98172 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.27□□□□□ -0.29
EFNB1P98172 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
EFNB1P98172 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.27□□□□□ -0.29
EFNB1P98172 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.27□□□□□ -0.29
EFNB1P98172 TUBB8P4-201ENST00000511806 1324 ntBASIC13.27□□□□□ -0.29
EFNB1P98172 AC114271.1-201ENST00000612689 2813 ntBASIC13.27□□□□□ -0.29
EFNB1P98172 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
EFNB1P98172 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.27□□□□□ -0.29
EFNB1P98172 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.27□□□□□ -0.29
EFNB1P98172 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
EFNB1P98172 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
EFNB1P98172 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
EFNB1P98172 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
EFNB1P98172 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.26□□□□□ -0.29
EFNB1P98172 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.26□□□□□ -0.29
EFNB1P98172 AC134915.1-201ENST00000426461 574 ntBASIC13.26□□□□□ -0.29
EFNB1P98172 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.26□□□□□ -0.29
EFNB1P98172 DNAJB3-202ENST00000449667 1266 ntBASIC13.26□□□□□ -0.29
EFNB1P98172 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.26□□□□□ -0.29
EFNB1P98172 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.26□□□□□ -0.29
EFNB1P98172 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.26□□□□□ -0.29
EFNB1P98172 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
EFNB1P98172 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.26□□□□□ -0.29
EFNB1P98172 AC124283.3-201ENST00000570869 594 ntBASIC13.26□□□□□ -0.29
EFNB1P98172 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.26□□□□□ -0.29
EFNB1P98172 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.26□□□□□ -0.29
EFNB1P98172 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 MIR8072-201ENST00000614241 80 ntBASIC13.26□□□□□ -0.29
EFNB1P98172 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 AC004241.5-201ENST00000623870 2448 ntBASIC13.26□□□□□ -0.29
EFNB1P98172 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
EFNB1P98172 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
EFNB1P98172 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
EFNB1P98172 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
EFNB1P98172 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
EFNB1P98172 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
EFNB1P98172 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
EFNB1P98172 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.25□□□□□ -0.29
EFNB1P98172 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms