Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.56□□□□□ -0.72
CKS1BP61024 AL450472.2-201ENST00000603663 1156 ntBASIC10.56□□□□□ -0.72
CKS1BP61024 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC10.56□□□□□ -0.72
CKS1BP61024 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 SPTSSB-204ENST00000617024 1292 ntBASIC10.56□□□□□ -0.72
CKS1BP61024 AQP6-205ENST00000618286 829 ntTSL 5 BASIC10.56□□□□□ -0.72
CKS1BP61024 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC10.56□□□□□ -0.72
CKS1BP61024 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC10.56□□□□□ -0.72
CKS1BP61024 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC10.56□□□□□ -0.72
CKS1BP61024 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC10.56□□□□□ -0.72
CKS1BP61024 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC10.56□□□□□ -0.72
CKS1BP61024 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 AC025580.3-201ENST00000617932 1424 ntBASIC10.56□□□□□ -0.72
CKS1BP61024 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC10.56□□□□□ -0.72
CKS1BP61024 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC10.56□□□□□ -0.72
CKS1BP61024 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC10.56□□□□□ -0.72
CKS1BP61024 AC018892.3-201ENST00000623986 2499 ntBASIC10.56□□□□□ -0.72
CKS1BP61024 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
CKS1BP61024 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC10.55□□□□□ -0.72
CKS1BP61024 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
CKS1BP61024 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC10.55□□□□□ -0.72
CKS1BP61024 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC10.55□□□□□ -0.72
CKS1BP61024 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CKS1BP61024 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC10.55□□□□□ -0.72
CKS1BP61024 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 AL445209.1-201ENST00000607269 3491 ntBASIC10.55□□□□□ -0.72
CKS1BP61024 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
CKS1BP61024 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC10.55□□□□□ -0.72
CKS1BP61024 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CKS1BP61024 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC10.55□□□□□ -0.72
CKS1BP61024 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC10.55□□□□□ -0.72
CKS1BP61024 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC10.55□□□□□ -0.72
CKS1BP61024 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
CKS1BP61024 AC004870.1-201ENST00000315132 882 ntBASIC10.55□□□□□ -0.72
CKS1BP61024 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC10.55□□□□□ -0.72
CKS1BP61024 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CKS1BP61024 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.55□□□□□ -0.72
CKS1BP61024 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC10.55□□□□□ -0.72
CKS1BP61024 AL031284.1-201ENST00000419297 478 ntBASIC10.55□□□□□ -0.72
CKS1BP61024 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 RNA5SP410-201ENST00000516285 106 ntBASIC10.55□□□□□ -0.72
CKS1BP61024 AC112191.1-201ENST00000523689 701 ntBASIC10.55□□□□□ -0.72
CKS1BP61024 AC105233.2-201ENST00000523697 349 ntBASIC10.55□□□□□ -0.72
CKS1BP61024 AF228730.5-201ENST00000530288 346 ntBASIC10.55□□□□□ -0.72
CKS1BP61024 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC10.55□□□□□ -0.72
CKS1BP61024 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS1BP61024 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC10.55□□□□□ -0.72
CKS1BP61024 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 AL031008.1-201ENST00000619963 541 ntBASIC10.55□□□□□ -0.72
CKS1BP61024 AC148477.8-201ENST00000624298 468 ntBASIC10.55□□□□□ -0.72
CKS1BP61024 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS1BP61024 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS1BP61024 AC092135.3-201ENST00000624151 1846 ntBASIC10.55□□□□□ -0.72
CKS1BP61024 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC10.55□□□□□ -0.72
CKS1BP61024 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC10.55□□□□□ -0.72
CKS1BP61024 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CKS1BP61024 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms