Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 AC015818.8-201ENST00000587907 1519 ntBASIC15.8■□□□□ 0.12
CACNA2D1P54289 AC007191.1-201ENST00000623179 2995 ntBASIC15.8■□□□□ 0.12
CACNA2D1P54289 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 MTX1P1-201ENST00000440904 838 ntBASIC15.8■□□□□ 0.12
CACNA2D1P54289 AL591846.1-201ENST00000451736 433 ntBASIC15.8■□□□□ 0.12
CACNA2D1P54289 ZNF767P-206ENST00000513792 565 ntBASIC15.8■□□□□ 0.12
CACNA2D1P54289 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 AL358472.3-201ENST00000608147 415 ntBASIC15.8■□□□□ 0.12
CACNA2D1P54289 AC091271.1-201ENST00000611877 1162 ntBASIC15.8■□□□□ 0.12
CACNA2D1P54289 ZACNP1-201ENST00000612259 710 ntBASIC15.8■□□□□ 0.12
CACNA2D1P54289 AC015656.1-201ENST00000624209 3578 ntBASIC15.8■□□□□ 0.12
CACNA2D1P54289 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 AC079781.5-202ENST00000641784 3743 ntBASIC15.8■□□□□ 0.12
CACNA2D1P54289 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CACNA2D1P54289 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CACNA2D1P54289 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 AC100850.1-201ENST00000506768 649 ntBASIC15.79■□□□□ 0.12
CACNA2D1P54289 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 AP001002.3-201ENST00000623482 206 ntBASIC15.79■□□□□ 0.12
CACNA2D1P54289 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 AC013726.1-201ENST00000563747 2285 ntBASIC15.79■□□□□ 0.12
CACNA2D1P54289 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CACNA2D1P54289 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.79■□□□□ 0.12
CACNA2D1P54289 AC018735.1-201ENST00000437208 1502 ntBASIC15.78■□□□□ 0.12
CACNA2D1P54289 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CACNA2D1P54289 AC005840.4-201ENST00000541242 2494 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms