Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.74■□□□□ 0.27
USP11P51784 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP11P51784 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.74■□□□□ 0.27
USP11P51784 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
USP11P51784 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.74■□□□□ 0.27
USP11P51784 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.74■□□□□ 0.27
USP11P51784 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.74■□□□□ 0.27
USP11P51784 TPT1P11-201ENST00000458482 498 ntBASIC16.74■□□□□ 0.27
USP11P51784 AC092658.1-201ENST00000505836 891 ntBASIC16.74■□□□□ 0.27
USP11P51784 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.74■□□□□ 0.27
USP11P51784 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.74■□□□□ 0.27
USP11P51784 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.74■□□□□ 0.27
USP11P51784 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP11P51784 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP11P51784 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
USP11P51784 AC005695.3-201ENST00000614522 232 ntBASIC16.74■□□□□ 0.27
USP11P51784 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.74■□□□□ 0.27
USP11P51784 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.74■□□□□ 0.27
USP11P51784 AL023803.2-201ENST00000620080 638 ntBASIC16.74■□□□□ 0.27
USP11P51784 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.74■□□□□ 0.27
USP11P51784 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.74■□□□□ 0.27
USP11P51784 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.74■□□□□ 0.27
USP11P51784 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
USP11P51784 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP11P51784 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP11P51784 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP11P51784 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP11P51784 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
USP11P51784 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.74■□□□□ 0.27
USP11P51784 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP11P51784 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP11P51784 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP11P51784 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP11P51784 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.74■□□□□ 0.27
USP11P51784 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
USP11P51784 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP11P51784 AC006504.5-208ENST00000588784 2401 ntBASIC16.74■□□□□ 0.27
USP11P51784 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP11P51784 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP11P51784 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.73■□□□□ 0.27
USP11P51784 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.73■□□□□ 0.27
USP11P51784 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.73■□□□□ 0.27
USP11P51784 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.73■□□□□ 0.27
USP11P51784 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
USP11P51784 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.73■□□□□ 0.27
USP11P51784 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 AC009093.10-201ENST00000641956 1442 ntBASIC16.73■□□□□ 0.27
USP11P51784 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 FAM86MP-201ENST00000340703 885 ntBASIC16.73■□□□□ 0.27
USP11P51784 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
USP11P51784 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.73■□□□□ 0.27
USP11P51784 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.73■□□□□ 0.27
USP11P51784 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.73■□□□□ 0.27
USP11P51784 TUBB8P8-201ENST00000458717 1058 ntBASIC16.73■□□□□ 0.27
USP11P51784 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.73■□□□□ 0.27
USP11P51784 AC108725.1-201ENST00000495472 409 ntBASIC16.73■□□□□ 0.27
USP11P51784 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.73■□□□□ 0.27
USP11P51784 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
USP11P51784 AC100827.2-201ENST00000563214 1194 ntBASIC16.73■□□□□ 0.27
USP11P51784 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.73■□□□□ 0.27
USP11P51784 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.73■□□□□ 0.27
USP11P51784 AC005324.6-201ENST00000587972 613 ntBASIC16.73■□□□□ 0.27
USP11P51784 MIR6869-201ENST00000619434 62 ntBASIC16.73■□□□□ 0.27
USP11P51784 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.73■□□□□ 0.27
USP11P51784 AC023908.3-201ENST00000564211 3047 ntBASIC16.73■□□□□ 0.27
USP11P51784 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.73■□□□□ 0.27
USP11P51784 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.73■□□□□ 0.27
USP11P51784 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 KRT8P28-201ENST00000433288 1390 ntBASIC16.73■□□□□ 0.27
USP11P51784 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.73■□□□□ 0.27
USP11P51784 MYADML-201ENST00000474610 2147 ntBASIC16.73■□□□□ 0.27
USP11P51784 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
USP11P51784 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.73■□□□□ 0.27
USP11P51784 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
USP11P51784 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
USP11P51784 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
USP11P51784 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP11P51784 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.73■□□□□ 0.27
USP11P51784 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
USP11P51784 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
USP11P51784 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP11P51784 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
USP11P51784 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms