Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RNF144AP50876 CICP4-201ENST00000447359 2812 ntBASIC13.93□□□□□ -0.18
RNF144AP50876 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RNF144AP50876 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF144AP50876 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 KRT8P14-201ENST00000414254 1442 ntBASIC13.93□□□□□ -0.18
RNF144AP50876 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF144AP50876 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RNF144AP50876 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 AL139094.1-201ENST00000405549 1188 ntBASIC13.93□□□□□ -0.18
RNF144AP50876 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF144AP50876 AC093433.1-201ENST00000458048 571 ntBASIC13.93□□□□□ -0.18
RNF144AP50876 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 AP005018.1-201ENST00000525475 301 ntBASIC13.93□□□□□ -0.18
RNF144AP50876 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.93□□□□□ -0.18
RNF144AP50876 AC026790.2-201ENST00000606282 430 ntBASIC13.93□□□□□ -0.18
RNF144AP50876 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF144AP50876 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RNF144AP50876 RPSAP52-203ENST00000622976 1023 ntBASIC13.93□□□□□ -0.18
RNF144AP50876 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RNF144AP50876 LRRC59-203ENST00000576448 1531 ntBASIC13.93□□□□□ -0.18
RNF144AP50876 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF144AP50876 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RNF144AP50876 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RNF144AP50876 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF144AP50876 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF144AP50876 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF144AP50876 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF144AP50876 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
RNF144AP50876 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF144AP50876 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
RNF144AP50876 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RNF144AP50876 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RNF144AP50876 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RNF144AP50876 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF144AP50876 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RNF144AP50876 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RNF144AP50876 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF144AP50876 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
RNF144AP50876 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF144AP50876 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 TMEM14DP-201ENST00000422205 345 ntBASIC13.92□□□□□ -0.18
RNF144AP50876 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF144AP50876 EIF3FP3-201ENST00000434851 1086 ntBASIC13.92□□□□□ -0.18
RNF144AP50876 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.92□□□□□ -0.18
RNF144AP50876 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RNF144AP50876 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF144AP50876 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RNF144AP50876 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.92□□□□□ -0.18
RNF144AP50876 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF144AP50876 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
RNF144AP50876 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF144AP50876 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF144AP50876 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF144AP50876 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF144AP50876 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.92□□□□□ -0.18
RNF144AP50876 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
RNF144AP50876 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF144AP50876 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.92□□□□□ -0.18
RNF144AP50876 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF144AP50876 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RNF144AP50876 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF144AP50876 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF144AP50876 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF144AP50876 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RNF144AP50876 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms