Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 AP005117.1-202ENST00000581724 1908 ntBASIC16.51■□□□□ 0.23
TM4SF4P48230 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.51■□□□□ 0.23
TM4SF4P48230 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TM4SF4P48230 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TM4SF4P48230 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.51■□□□□ 0.23
TM4SF4P48230 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC16.51■□□□□ 0.23
TM4SF4P48230 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.51■□□□□ 0.23
TM4SF4P48230 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.51■□□□□ 0.23
TM4SF4P48230 HNRNPA1P16-201ENST00000575692 955 ntBASIC16.51■□□□□ 0.23
TM4SF4P48230 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.51■□□□□ 0.23
TM4SF4P48230 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC16.51■□□□□ 0.23
TM4SF4P48230 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC16.51■□□□□ 0.23
TM4SF4P48230 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.51■□□□□ 0.23
TM4SF4P48230 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TM4SF4P48230 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.51■□□□□ 0.23
TM4SF4P48230 CR392039.1-201ENST00000623217 204 ntBASIC16.51■□□□□ 0.23
TM4SF4P48230 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.51■□□□□ 0.23
TM4SF4P48230 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.51■□□□□ 0.23
TM4SF4P48230 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 ODCP-201ENST00000459650 1639 ntBASIC16.51■□□□□ 0.23
TM4SF4P48230 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.51■□□□□ 0.23
TM4SF4P48230 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.51■□□□□ 0.23
TM4SF4P48230 CYP2T1P-202ENST00000641596 2535 ntBASIC16.51■□□□□ 0.23
TM4SF4P48230 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TM4SF4P48230 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
TM4SF4P48230 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF4P48230 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TM4SF4P48230 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TM4SF4P48230 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 AC092850.2-201ENST00000623821 2697 ntBASIC16.5■□□□□ 0.23
TM4SF4P48230 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TM4SF4P48230 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC16.5■□□□□ 0.23
TM4SF4P48230 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.5■□□□□ 0.23
TM4SF4P48230 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 BX679664.3-201ENST00000414070 555 ntBASIC16.5■□□□□ 0.23
TM4SF4P48230 PGAM1P11-201ENST00000416729 680 ntBASIC16.5■□□□□ 0.23
TM4SF4P48230 AP000244.1-201ENST00000424582 201 ntBASIC16.5■□□□□ 0.23
TM4SF4P48230 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC16.5■□□□□ 0.23
TM4SF4P48230 AC113935.1-201ENST00000471722 555 ntBASIC16.5■□□□□ 0.23
TM4SF4P48230 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TM4SF4P48230 RPS18P9-201ENST00000482817 460 ntBASIC16.5■□□□□ 0.23
TM4SF4P48230 RN7SL147P-201ENST00000487345 298 ntBASIC16.5■□□□□ 0.23
TM4SF4P48230 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC16.5■□□□□ 0.23
TM4SF4P48230 KLF17P1-201ENST00000547105 1126 ntBASIC16.5■□□□□ 0.23
TM4SF4P48230 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.5■□□□□ 0.23
TM4SF4P48230 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC16.5■□□□□ 0.23
TM4SF4P48230 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.5■□□□□ 0.23
TM4SF4P48230 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TM4SF4P48230 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TM4SF4P48230 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.5■□□□□ 0.23
TM4SF4P48230 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.5■□□□□ 0.23
TM4SF4P48230 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TM4SF4P48230 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TM4SF4P48230 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.5■□□□□ 0.23
TM4SF4P48230 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM4SF4P48230 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TM4SF4P48230 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TM4SF4P48230 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TM4SF4P48230 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC16.49■□□□□ 0.23
TM4SF4P48230 LAP3P2-201ENST00000454686 1454 ntBASIC16.49■□□□□ 0.23
TM4SF4P48230 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TM4SF4P48230 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.49■□□□□ 0.23
TM4SF4P48230 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TM4SF4P48230 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TM4SF4P48230 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TM4SF4P48230 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TM4SF4P48230 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TM4SF4P48230 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TM4SF4P48230 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TM4SF4P48230 AC104961.1-201ENST00000427605 771 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms