Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT9P35527 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT9P35527 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT9P35527 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
KRT9P35527 DFFBP1-201ENST00000433250 979 ntBASIC16.35■□□□□ 0.21
KRT9P35527 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT9P35527 VDAC1P7-201ENST00000462417 847 ntBASIC16.35■□□□□ 0.21
KRT9P35527 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT9P35527 AC026410.3-201ENST00000514280 936 ntBASIC16.35■□□□□ 0.21
KRT9P35527 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.35■□□□□ 0.21
KRT9P35527 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.35■□□□□ 0.21
KRT9P35527 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.35■□□□□ 0.21
KRT9P35527 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.35■□□□□ 0.21
KRT9P35527 AC099568.2-201ENST00000609194 695 ntBASIC16.35■□□□□ 0.21
KRT9P35527 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT9P35527 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT9P35527 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.35■□□□□ 0.21
KRT9P35527 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT9P35527 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
KRT9P35527 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT9P35527 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT9P35527 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.35■□□□□ 0.21
KRT9P35527 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT9P35527 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT9P35527 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT9P35527 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT9P35527 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT9P35527 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT9P35527 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT9P35527 KRT8P14-201ENST00000414254 1442 ntBASIC16.35■□□□□ 0.21
KRT9P35527 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
KRT9P35527 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT9P35527 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
KRT9P35527 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT9P35527 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT9P35527 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT9P35527 AC079781.5-202ENST00000641784 3743 ntBASIC16.34■□□□□ 0.21
KRT9P35527 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
KRT9P35527 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KRT9P35527 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KRT9P35527 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
KRT9P35527 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KRT9P35527 FAM207CP-201ENST00000443486 507 ntBASIC16.34■□□□□ 0.21
KRT9P35527 BCRP1-201ENST00000444246 691 ntBASIC16.34■□□□□ 0.21
KRT9P35527 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.34■□□□□ 0.21
KRT9P35527 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT9P35527 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT9P35527 SPCS2P1-201ENST00000561636 679 ntBASIC16.34■□□□□ 0.21
KRT9P35527 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.34■□□□□ 0.21
KRT9P35527 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT9P35527 AC107373.2-201ENST00000607735 490 ntBASIC16.34■□□□□ 0.21
KRT9P35527 AL662799.1-202ENST00000614205 422 ntBASIC16.34■□□□□ 0.21
KRT9P35527 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KRT9P35527 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT9P35527 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 AL391825.1-201ENST00000457671 1364 ntBASIC16.34■□□□□ 0.21
KRT9P35527 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KRT9P35527 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
KRT9P35527 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT9P35527 AL138799.1-201ENST00000448213 1675 ntBASIC16.34■□□□□ 0.21
KRT9P35527 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT9P35527 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT9P35527 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
KRT9P35527 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.33■□□□□ 0.21
KRT9P35527 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
KRT9P35527 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT9P35527 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
KRT9P35527 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT9P35527 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.33■□□□□ 0.21
KRT9P35527 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.33■□□□□ 0.21
KRT9P35527 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
KRT9P35527 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT9P35527 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT9P35527 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT9P35527 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
KRT9P35527 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
KRT9P35527 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT9P35527 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT9P35527 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms