Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LAMA1P25391 AC019109.1-201ENST00000401725 1874 ntBASIC14.16□□□□□ -0.14
LAMA1P25391 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LAMA1P25391 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
LAMA1P25391 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LAMA1P25391 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LAMA1P25391 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LAMA1P25391 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.16□□□□□ -0.14
LAMA1P25391 RPL5P21-201ENST00000404620 815 ntBASIC14.16□□□□□ -0.14
LAMA1P25391 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.16□□□□□ -0.14
LAMA1P25391 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LAMA1P25391 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.16□□□□□ -0.14
LAMA1P25391 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LAMA1P25391 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.16□□□□□ -0.14
LAMA1P25391 AP005264.6-204ENST00000588436 719 ntBASIC14.16□□□□□ -0.14
LAMA1P25391 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.16□□□□□ -0.14
LAMA1P25391 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LAMA1P25391 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.16□□□□□ -0.14
LAMA1P25391 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LAMA1P25391 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
LAMA1P25391 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
LAMA1P25391 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LAMA1P25391 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LAMA1P25391 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.16□□□□□ -0.14
LAMA1P25391 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LAMA1P25391 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.16□□□□□ -0.14
LAMA1P25391 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LAMA1P25391 AC004522.1-201ENST00000419978 654 ntBASIC14.16□□□□□ -0.14
LAMA1P25391 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.16□□□□□ -0.14
LAMA1P25391 AC092580.1-201ENST00000433998 658 ntBASIC14.16□□□□□ -0.14
LAMA1P25391 ST13P19-201ENST00000442505 1124 ntBASIC14.16□□□□□ -0.14
LAMA1P25391 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.16□□□□□ -0.14
LAMA1P25391 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LAMA1P25391 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.16□□□□□ -0.14
LAMA1P25391 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LAMA1P25391 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.15□□□□□ -0.14
LAMA1P25391 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
LAMA1P25391 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LAMA1P25391 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LAMA1P25391 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.15□□□□□ -0.14
LAMA1P25391 ACTG1P19-201ENST00000418987 1116 ntBASIC14.15□□□□□ -0.14
LAMA1P25391 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LAMA1P25391 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.15□□□□□ -0.14
LAMA1P25391 GOLGA2P7-209ENST00000560408 745 ntBASIC14.15□□□□□ -0.14
LAMA1P25391 AC018695.6-201ENST00000614011 534 ntBASIC14.15□□□□□ -0.14
LAMA1P25391 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.15□□□□□ -0.14
LAMA1P25391 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.15□□□□□ -0.14
LAMA1P25391 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
LAMA1P25391 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LAMA1P25391 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.15□□□□□ -0.14
LAMA1P25391 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
LAMA1P25391 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.15□□□□□ -0.14
LAMA1P25391 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LAMA1P25391 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LAMA1P25391 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.15□□□□□ -0.14
LAMA1P25391 RPL35P9-201ENST00000446059 350 ntBASIC14.15□□□□□ -0.14
LAMA1P25391 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.15□□□□□ -0.14
LAMA1P25391 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LAMA1P25391 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.15□□□□□ -0.14
LAMA1P25391 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.15□□□□□ -0.14
LAMA1P25391 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 AL365181.3-201ENST00000605886 3222 ntBASIC14.15□□□□□ -0.14
LAMA1P25391 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.15□□□□□ -0.14
LAMA1P25391 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LAMA1P25391 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LAMA1P25391 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LAMA1P25391 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.14□□□□□ -0.15
LAMA1P25391 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMA1P25391 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMA1P25391 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.14□□□□□ -0.15
LAMA1P25391 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMA1P25391 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LAMA1P25391 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LAMA1P25391 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.14□□□□□ -0.15
LAMA1P25391 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMA1P25391 AC108734.2-201ENST00000420887 1069 ntBASIC14.14□□□□□ -0.15
LAMA1P25391 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMA1P25391 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMA1P25391 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC14.14□□□□□ -0.15
LAMA1P25391 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LAMA1P25391 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms