Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 AL158070.2-201ENST00000623713 1621 ntBASIC14.4□□□□□ -0.1
CAPN3P20807 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.4□□□□□ -0.1
CAPN3P20807 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.4□□□□□ -0.1
CAPN3P20807 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CAPN3P20807 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CAPN3P20807 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.39□□□□□ -0.11
CAPN3P20807 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CAPN3P20807 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN3P20807 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.39□□□□□ -0.11
CAPN3P20807 CICP17-201ENST00000418553 2377 ntBASIC14.39□□□□□ -0.11
CAPN3P20807 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CAPN3P20807 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN3P20807 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CAPN3P20807 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CAPN3P20807 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CAPN3P20807 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN3P20807 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CAPN3P20807 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CAPN3P20807 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN3P20807 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN3P20807 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.39□□□□□ -0.11
CAPN3P20807 RAB43P1-201ENST00000561790 589 ntBASIC14.39□□□□□ -0.11
CAPN3P20807 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.39□□□□□ -0.11
CAPN3P20807 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN3P20807 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.39□□□□□ -0.11
CAPN3P20807 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CAPN3P20807 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CAPN3P20807 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN3P20807 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CAPN3P20807 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CAPN3P20807 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.39□□□□□ -0.11
CAPN3P20807 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CAPN3P20807 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN3P20807 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
CAPN3P20807 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CAPN3P20807 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN3P20807 AC005252.3-201ENST00000623855 2258 ntBASIC14.39□□□□□ -0.11
CAPN3P20807 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CAPN3P20807 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CAPN3P20807 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN3P20807 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CAPN3P20807 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CAPN3P20807 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.38□□□□□ -0.11
CAPN3P20807 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 INE2-201ENST00000630399 1874 ntBASIC14.38□□□□□ -0.11
CAPN3P20807 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CAPN3P20807 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.38□□□□□ -0.11
CAPN3P20807 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN3P20807 DFFBP1-201ENST00000433250 979 ntBASIC14.38□□□□□ -0.11
CAPN3P20807 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPN3P20807 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPN3P20807 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CAPN3P20807 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPN3P20807 API5-211ENST00000534695 560 ntTSL 5 BASIC14.38□□□□□ -0.11
CAPN3P20807 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPN3P20807 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.38□□□□□ -0.11
CAPN3P20807 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.38□□□□□ -0.11
CAPN3P20807 AL844908.2-201ENST00000609461 460 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms