Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 AC011742.3-201ENST00000439053 820 ntBASIC17.25■□□□□ 0.35
ERCC3P19447 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.25■□□□□ 0.35
ERCC3P19447 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.25■□□□□ 0.35
ERCC3P19447 TUBB8P8-201ENST00000458717 1058 ntBASIC17.25■□□□□ 0.35
ERCC3P19447 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 RN7SL163P-201ENST00000583100 276 ntBASIC17.25■□□□□ 0.35
ERCC3P19447 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.25■□□□□ 0.35
ERCC3P19447 AC002472.3-201ENST00000640124 621 ntBASIC17.25■□□□□ 0.35
ERCC3P19447 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ERCC3P19447 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.25■□□□□ 0.35
ERCC3P19447 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.25■□□□□ 0.35
ERCC3P19447 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.25■□□□□ 0.35
ERCC3P19447 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ERCC3P19447 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 AC009093.2-202ENST00000620513 2079 ntBASIC17.25■□□□□ 0.35
ERCC3P19447 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ERCC3P19447 AC008132.1-202ENST00000342005 1389 ntBASIC17.25■□□□□ 0.35
ERCC3P19447 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.25■□□□□ 0.35
ERCC3P19447 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ERCC3P19447 AL359258.3-201ENST00000622910 2331 ntBASIC17.25■□□□□ 0.35
ERCC3P19447 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.24■□□□□ 0.35
ERCC3P19447 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.24■□□□□ 0.35
ERCC3P19447 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.24■□□□□ 0.35
ERCC3P19447 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.24■□□□□ 0.35
ERCC3P19447 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.24■□□□□ 0.35
ERCC3P19447 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.24■□□□□ 0.35
ERCC3P19447 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.24■□□□□ 0.35
ERCC3P19447 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.24■□□□□ 0.35
ERCC3P19447 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.24■□□□□ 0.35
ERCC3P19447 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ERCC3P19447 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.24■□□□□ 0.35
ERCC3P19447 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ERCC3P19447 ACTG1P2-201ENST00000415776 1125 ntBASIC17.24■□□□□ 0.35
ERCC3P19447 ACTG1P11-201ENST00000425411 1125 ntBASIC17.24■□□□□ 0.35
ERCC3P19447 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.24■□□□□ 0.35
ERCC3P19447 FGFR3P5-201ENST00000564496 886 ntBASIC17.24■□□□□ 0.35
ERCC3P19447 RN7SL574P-201ENST00000581512 297 ntBASIC17.24■□□□□ 0.35
ERCC3P19447 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.24■□□□□ 0.35
ERCC3P19447 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.24■□□□□ 0.35
ERCC3P19447 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.24■□□□□ 0.35
ERCC3P19447 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ERCC3P19447 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ERCC3P19447 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
ERCC3P19447 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ERCC3P19447 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ERCC3P19447 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC3P19447 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC3P19447 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC3P19447 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ERCC3P19447 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ERCC3P19447 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ERCC3P19447 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.23■□□□□ 0.35
ERCC3P19447 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC3P19447 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC3P19447 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 AC024681.1-201ENST00000521917 487 ntBASIC17.23■□□□□ 0.35
ERCC3P19447 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms