Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 AL442647.2-201ENST00000429864 857 ntBASIC13.62□□□□□ -0.23
CD53P19397 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.62□□□□□ -0.23
CD53P19397 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.62□□□□□ -0.23
CD53P19397 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.62□□□□□ -0.23
CD53P19397 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CD53P19397 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.62□□□□□ -0.23
CD53P19397 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.62□□□□□ -0.23
CD53P19397 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.62□□□□□ -0.23
CD53P19397 AC036164.1-201ENST00000570544 333 ntBASIC13.62□□□□□ -0.23
CD53P19397 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.62□□□□□ -0.23
CD53P19397 AL391069.4-201ENST00000609583 481 ntBASIC13.62□□□□□ -0.23
CD53P19397 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 AC055811.4-201ENST00000624039 1754 ntBASIC13.62□□□□□ -0.23
CD53P19397 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.62□□□□□ -0.23
CD53P19397 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CD53P19397 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD53P19397 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.61□□□□□ -0.23
CD53P19397 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.61□□□□□ -0.23
CD53P19397 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 Z97205.2-201ENST00000564697 1639 ntBASIC13.61□□□□□ -0.23
CD53P19397 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CD53P19397 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.61□□□□□ -0.23
CD53P19397 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
CD53P19397 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.61□□□□□ -0.23
CD53P19397 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CD53P19397 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.61□□□□□ -0.23
CD53P19397 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.61□□□□□ -0.23
CD53P19397 ACTG1P3-201ENST00000431775 1114 ntBASIC13.61□□□□□ -0.23
CD53P19397 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.61□□□□□ -0.23
CD53P19397 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.61□□□□□ -0.23
CD53P19397 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CD53P19397 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.61□□□□□ -0.23
CD53P19397 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.61□□□□□ -0.23
CD53P19397 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.61□□□□□ -0.23
CD53P19397 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.61□□□□□ -0.23
CD53P19397 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.61□□□□□ -0.23
CD53P19397 MIR5189-201ENST00000577370 114 ntBASIC13.61□□□□□ -0.23
CD53P19397 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.61□□□□□ -0.23
CD53P19397 AC133539.2-201ENST00000604757 467 ntBASIC13.61□□□□□ -0.23
CD53P19397 AL022328.1-201ENST00000610050 478 ntBASIC13.61□□□□□ -0.23
CD53P19397 CU634019.7-201ENST00000624153 1185 ntBASIC13.61□□□□□ -0.23
CD53P19397 FP236241.2-201ENST00000624906 1185 ntBASIC13.61□□□□□ -0.23
CD53P19397 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.61□□□□□ -0.23
CD53P19397 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CD53P19397 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.61□□□□□ -0.23
CD53P19397 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.61□□□□□ -0.23
CD53P19397 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.61□□□□□ -0.23
CD53P19397 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CD53P19397 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
CD53P19397 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.61□□□□□ -0.23
CD53P19397 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.61□□□□□ -0.23
CD53P19397 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CD53P19397 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.61□□□□□ -0.23
CD53P19397 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.61□□□□□ -0.23
CD53P19397 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.61□□□□□ -0.23
CD53P19397 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CD53P19397 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.61□□□□□ -0.23
CD53P19397 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD53P19397 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD53P19397 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.6□□□□□ -0.23
CD53P19397 AP001267.2-201ENST00000532619 2086 ntBASIC13.6□□□□□ -0.23
CD53P19397 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CD53P19397 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD53P19397 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD53P19397 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD53P19397 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms