Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDH1P12830 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH1P12830 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CDH1P12830 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH1P12830 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDH1P12830 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CDH1P12830 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CDH1P12830 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH1P12830 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.57□□□□□ -0.08
CDH1P12830 KRT17P7-201ENST00000451704 1104 ntBASIC14.57□□□□□ -0.08
CDH1P12830 USP32P1-208ENST00000506594 1164 ntBASIC14.57□□□□□ -0.08
CDH1P12830 AP001889.1-201ENST00000525414 633 ntBASIC14.57□□□□□ -0.08
CDH1P12830 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.57□□□□□ -0.08
CDH1P12830 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.57□□□□□ -0.08
CDH1P12830 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CDH1P12830 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.57□□□□□ -0.08
CDH1P12830 AC015936.2-201ENST00000593177 259 ntBASIC14.57□□□□□ -0.08
CDH1P12830 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH1P12830 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH1P12830 AC145423.3-201ENST00000615987 467 ntBASIC14.57□□□□□ -0.08
CDH1P12830 AC097359.2-201ENST00000604992 2389 ntBASIC14.57□□□□□ -0.08
CDH1P12830 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CDH1P12830 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH1P12830 AL928921.2-201ENST00000641325 2442 ntBASIC14.57□□□□□ -0.08
CDH1P12830 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH1P12830 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH1P12830 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH1P12830 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDH1P12830 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH1P12830 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH1P12830 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CDH1P12830 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH1P12830 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH1P12830 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CDH1P12830 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDH1P12830 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH1P12830 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH1P12830 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH1P12830 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
CDH1P12830 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH1P12830 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
CDH1P12830 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CDH1P12830 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH1P12830 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDH1P12830 AL355864.2-201ENST00000447420 863 ntBASIC14.56□□□□□ -0.08
CDH1P12830 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH1P12830 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH1P12830 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDH1P12830 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH1P12830 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 CICP20-201ENST00000443330 2801 ntBASIC14.56□□□□□ -0.08
CDH1P12830 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDH1P12830 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms