Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 RN7SL81P-201ENST00000493781 261 ntBASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 MRPL22P1-201ENST00000505398 616 ntBASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 AC114947.1-202ENST00000514136 344 ntBASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 AC084781.1-201ENST00000613737 656 ntBASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 AC025262.2-201ENST00000623975 1056 ntBASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CSB-PGBD3P0DP91 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC19.52■□□□□ 0.71
CSB-PGBD3P0DP91 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
CSB-PGBD3P0DP91 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC19.52■□□□□ 0.71
CSB-PGBD3P0DP91 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 NUDT4P2-201ENST00000578341 546 ntBASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 AC099398.1-201ENST00000567919 2776 ntBASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 AC067930.6-201ENST00000623257 4947 ntBASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC19.51■□□□□ 0.71
CSB-PGBD3P0DP91 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 F10-203ENST00000409306 1450 ntTSL 3 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 OR2R1P-201ENST00000441404 914 ntBASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 RHEB-207ENST00000496004 744 ntTSL 2 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 AC009560.1-201ENST00000620208 434 ntBASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 C18orf15-201ENST00000623680 2534 ntBASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 AC020658.6-201ENST00000623564 1870 ntBASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSB-PGBD3P0DP91 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.49■□□□□ 0.71
CSB-PGBD3P0DP91 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms