Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 AC000077.1-201ENST00000420012 953 ntBASIC8.93□□□□□ -0.98
APOBP04114 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 AL136084.1-201ENST00000449172 318 ntBASIC8.93□□□□□ -0.98
APOBP04114 TREX1-203ENST00000456089 629 ntTSL 3 BASIC8.93□□□□□ -0.98
APOBP04114 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 SIGLEC22P-201ENST00000599104 714 ntBASIC8.93□□□□□ -0.98
APOBP04114 MVK-217ENST00000639206 367 ntTSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
APOBP04114 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC8.92□□□□□ -0.98
APOBP04114 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 AL080243.1-201ENST00000423293 1060 ntBASIC8.92□□□□□ -0.98
APOBP04114 AC008494.1-201ENST00000497612 796 ntBASIC8.92□□□□□ -0.98
APOBP04114 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 AP001462.1-201ENST00000594089 452 ntBASIC8.92□□□□□ -0.98
APOBP04114 IFNL3P1-201ENST00000595082 501 ntBASIC8.92□□□□□ -0.98
APOBP04114 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
APOBP04114 DKFZP434H168-201ENST00000567381 1905 ntBASIC8.92□□□□□ -0.98
APOBP04114 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
APOBP04114 SAT1-201ENST00000379251 801 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 SAT1-202ENST00000379253 909 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 SAT1-203ENST00000379254 868 ntTSL 3 BASIC8.92□□□□□ -0.98
APOBP04114 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC8.92□□□□□ -0.98
APOBP04114 FAM21EP-201ENST00000417804 985 ntBASIC8.92□□□□□ -0.98
APOBP04114 HNRNPA1P25-201ENST00000422644 937 ntBASIC8.92□□□□□ -0.98
APOBP04114 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 KRT18P62-201ENST00000446618 1287 ntBASIC8.92□□□□□ -0.98
APOBP04114 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 AL031673.1-201ENST00000611460 466 ntBASIC8.92□□□□□ -0.98
APOBP04114 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 AC073869.4-201ENST00000620841 800 ntBASIC8.92□□□□□ -0.98
APOBP04114 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
APOBP04114 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC8.92□□□□□ -0.98
APOBP04114 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 AC098657.1-201ENST00000416270 1135 ntBASIC8.92□□□□□ -0.98
APOBP04114 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
APOBP04114 AC120498.5-201ENST00000561757 299 ntBASIC8.92□□□□□ -0.98
APOBP04114 AC138627.1-201ENST00000641127 1257 ntBASIC8.92□□□□□ -0.98
APOBP04114 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
APOBP04114 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC8.92□□□□□ -0.98
APOBP04114 AC091951.1-201ENST00000512854 2465 ntBASIC8.92□□□□□ -0.98
APOBP04114 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 HLF-202ENST00000430986 1385 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
APOBP04114 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
APOBP04114 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 NRADDP-201ENST00000437305 691 ntBASIC8.92□□□□□ -0.98
APOBP04114 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
APOBP04114 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC8.92□□□□□ -0.98
APOBP04114 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC8.92□□□□□ -0.98
APOBP04114 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC8.92□□□□□ -0.98
APOBP04114 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC8.92□□□□□ -0.98
APOBP04114 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC8.92□□□□□ -0.98
APOBP04114 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC8.91□□□□□ -0.98
APOBP04114 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC8.91□□□□□ -0.98
APOBP04114 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms