Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGCRP04035 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGCRP04035 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCRP04035 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCRP04035 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HMGCRP04035 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.63■□□□□ 0.25
HMGCRP04035 AL354861.1-201ENST00000445213 355 ntBASIC16.63■□□□□ 0.25
HMGCRP04035 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.63■□□□□ 0.25
HMGCRP04035 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HMGCRP04035 ALG1L13P-202ENST00000519320 584 ntBASIC16.63■□□□□ 0.25
HMGCRP04035 MIR3180-2-201ENST00000581748 88 ntBASIC16.63■□□□□ 0.25
HMGCRP04035 RN7SL470P-201ENST00000583069 259 ntBASIC16.63■□□□□ 0.25
HMGCRP04035 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.63■□□□□ 0.25
HMGCRP04035 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGCRP04035 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCRP04035 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGCRP04035 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGCRP04035 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCRP04035 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HMGCRP04035 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HMGCRP04035 FER1L4-210ENST00000615531 5998 ntBASIC16.63■□□□□ 0.25
HMGCRP04035 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCRP04035 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCRP04035 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCRP04035 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCRP04035 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCRP04035 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCRP04035 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 HYMAI-201ENST00000635591 3347 ntBASIC16.62■□□□□ 0.25
HMGCRP04035 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 SALL4P5-201ENST00000419001 1760 ntBASIC16.62■□□□□ 0.25
HMGCRP04035 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCRP04035 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HMGCRP04035 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCRP04035 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 KRT18P36-201ENST00000411618 1276 ntBASIC16.62■□□□□ 0.25
HMGCRP04035 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.62■□□□□ 0.25
HMGCRP04035 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCRP04035 AC004837.1-201ENST00000446267 564 ntBASIC16.62■□□□□ 0.25
HMGCRP04035 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCRP04035 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCRP04035 GCOM2-201ENST00000509133 1104 ntBASIC16.62■□□□□ 0.25
HMGCRP04035 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCRP04035 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCRP04035 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCRP04035 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.62■□□□□ 0.25
HMGCRP04035 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 MIR5196-201ENST00000578146 115 ntBASIC16.62■□□□□ 0.25
HMGCRP04035 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCRP04035 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.62■□□□□ 0.25
HMGCRP04035 AC138466.5-201ENST00000624002 808 ntBASIC16.62■□□□□ 0.25
HMGCRP04035 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HMGCRP04035 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HMGCRP04035 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCRP04035 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCRP04035 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCRP04035 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.62■□□□□ 0.25
HMGCRP04035 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 AC136621.1-201ENST00000624017 2304 ntBASIC16.62■□□□□ 0.25
HMGCRP04035 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCRP04035 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCRP04035 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCRP04035 AC022532.1-201ENST00000624563 1728 ntBASIC16.62■□□□□ 0.25
HMGCRP04035 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HMGCRP04035 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
HMGCRP04035 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
HMGCRP04035 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.61■□□□□ 0.25
HMGCRP04035 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCRP04035 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HMGCRP04035 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HMGCRP04035 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HMGCRP04035 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.61■□□□□ 0.25
HMGCRP04035 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCRP04035 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.61■□□□□ 0.25
HMGCRP04035 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.61■□□□□ 0.25
HMGCRP04035 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCRP04035 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HMGCRP04035 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms