Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC126177.1-201ENST00000547829 2218 ntBASIC16.21■□□□□ 0.19
VTNP04004 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.21■□□□□ 0.19
VTNP04004 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.21■□□□□ 0.19
VTNP04004 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.21■□□□□ 0.19
VTNP04004 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.21■□□□□ 0.19
VTNP04004 AC006122.1-201ENST00000493323 440 ntBASIC16.21■□□□□ 0.19
VTNP04004 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.21■□□□□ 0.19
VTNP04004 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.21■□□□□ 0.19
VTNP04004 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.21■□□□□ 0.19
VTNP04004 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.21■□□□□ 0.19
VTNP04004 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.21■□□□□ 0.19
VTNP04004 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
VTNP04004 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VTNP04004 AC015967.2-201ENST00000624092 234 ntBASIC16.21■□□□□ 0.19
VTNP04004 AC006435.4-201ENST00000625037 234 ntBASIC16.21■□□□□ 0.19
VTNP04004 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.21■□□□□ 0.19
VTNP04004 AL356737.1-201ENST00000634391 234 ntBASIC16.21■□□□□ 0.19
VTNP04004 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.21■□□□□ 0.19
VTNP04004 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.21■□□□□ 0.19
VTNP04004 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.21■□□□□ 0.19
VTNP04004 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VTNP04004 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTNP04004 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.21■□□□□ 0.19
VTNP04004 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.21■□□□□ 0.18
VTNP04004 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
VTNP04004 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.21■□□□□ 0.18
VTNP04004 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VTNP04004 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
VTNP04004 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
VTNP04004 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VTNP04004 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VTNP04004 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VTNP04004 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.2■□□□□ 0.18
VTNP04004 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.2■□□□□ 0.18
VTNP04004 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.2■□□□□ 0.18
VTNP04004 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VTNP04004 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 AC144831.1-201ENST00000573312 2656 ntBASIC16.2■□□□□ 0.18
VTNP04004 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VTNP04004 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.2■□□□□ 0.18
VTNP04004 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
VTNP04004 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.2■□□□□ 0.18
VTNP04004 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.2■□□□□ 0.18
VTNP04004 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.2■□□□□ 0.18
VTNP04004 ISCA2P1-201ENST00000425548 448 ntBASIC16.2■□□□□ 0.18
VTNP04004 AL596276.2-201ENST00000447525 331 ntBASIC16.2■□□□□ 0.18
VTNP04004 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.2■□□□□ 0.18
VTNP04004 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.2■□□□□ 0.18
VTNP04004 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.2■□□□□ 0.18
VTNP04004 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.2■□□□□ 0.18
VTNP04004 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.2■□□□□ 0.18
VTNP04004 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 AL161670.2-201ENST00000557650 1227 ntBASIC16.2■□□□□ 0.18
VTNP04004 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 AC016629.1-201ENST00000596579 586 ntBASIC16.2■□□□□ 0.18
VTNP04004 NAP1L6-202ENST00000641404 1222 ntBASIC16.2■□□□□ 0.18
VTNP04004 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
VTNP04004 KRT8P19-201ENST00000551916 1455 ntBASIC16.2■□□□□ 0.18
VTNP04004 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.2■□□□□ 0.18
VTNP04004 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VTNP04004 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.2■□□□□ 0.18
VTNP04004 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 AC018529.2-202ENST00000611482 3087 ntBASIC16.2■□□□□ 0.18
VTNP04004 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTNP04004 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
VTNP04004 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VTNP04004 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
VTNP04004 AC006504.5-208ENST00000588784 2401 ntBASIC16.19■□□□□ 0.18
VTNP04004 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
VTNP04004 AC067930.6-201ENST00000623257 4947 ntBASIC16.19■□□□□ 0.18
VTNP04004 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VTNP04004 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VTNP04004 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.19■□□□□ 0.18
VTNP04004 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.19■□□□□ 0.18
VTNP04004 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.19■□□□□ 0.18
VTNP04004 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.19■□□□□ 0.18
VTNP04004 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VTNP04004 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms