Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.83□□□□□ -0.52
IFNA1P01562 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.83□□□□□ -0.52
IFNA1P01562 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.83□□□□□ -0.52
IFNA1P01562 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
IFNA1P01562 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.83□□□□□ -0.52
IFNA1P01562 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
IFNA1P01562 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
IFNA1P01562 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.83□□□□□ -0.52
IFNA1P01562 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.83□□□□□ -0.52
IFNA1P01562 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.83□□□□□ -0.52
IFNA1P01562 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
IFNA1P01562 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.83□□□□□ -0.52
IFNA1P01562 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
IFNA1P01562 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 AC116407.4-201ENST00000623319 1061 ntBASIC11.83□□□□□ -0.52
IFNA1P01562 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
IFNA1P01562 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.83□□□□□ -0.52
IFNA1P01562 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
IFNA1P01562 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.83□□□□□ -0.52
IFNA1P01562 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.83□□□□□ -0.52
IFNA1P01562 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
IFNA1P01562 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 AC007614.5-201ENST00000623424 8892 ntBASIC11.82□□□□□ -0.52
IFNA1P01562 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.82□□□□□ -0.52
IFNA1P01562 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
IFNA1P01562 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.82□□□□□ -0.52
IFNA1P01562 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 AZGP1P1-201ENST00000411909 902 ntBASIC11.82□□□□□ -0.52
IFNA1P01562 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.82□□□□□ -0.52
IFNA1P01562 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.82□□□□□ -0.52
IFNA1P01562 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.82□□□□□ -0.52
IFNA1P01562 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.82□□□□□ -0.52
IFNA1P01562 AC140658.5-201ENST00000438532 169 ntBASIC11.82□□□□□ -0.52
IFNA1P01562 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
IFNA1P01562 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
IFNA1P01562 FAM86EP-206ENST00000510506 987 ntBASIC11.82□□□□□ -0.52
IFNA1P01562 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.82□□□□□ -0.52
IFNA1P01562 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.82□□□□□ -0.52
IFNA1P01562 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.82□□□□□ -0.52
IFNA1P01562 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.82□□□□□ -0.52
IFNA1P01562 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 AC074044.1-201ENST00000609673 707 ntBASIC11.82□□□□□ -0.52
IFNA1P01562 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.82□□□□□ -0.52
IFNA1P01562 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
IFNA1P01562 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
IFNA1P01562 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
IFNA1P01562 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.82□□□□□ -0.52
IFNA1P01562 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 AC111170.3-201ENST00000624282 2464 ntBASIC11.82□□□□□ -0.52
IFNA1P01562 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.82□□□□□ -0.52
IFNA1P01562 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms