Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.73■□□□□ 0.11
RTN3O95197 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.73■□□□□ 0.11
RTN3O95197 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 ZBED1P1-201ENST00000502364 1930 ntBASIC15.73■□□□□ 0.11
RTN3O95197 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.73■□□□□ 0.11
RTN3O95197 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.73■□□□□ 0.11
RTN3O95197 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RTN3O95197 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.73■□□□□ 0.11
RTN3O95197 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.73■□□□□ 0.11
RTN3O95197 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.73■□□□□ 0.11
RTN3O95197 AL591846.1-201ENST00000451736 433 ntBASIC15.73■□□□□ 0.11
RTN3O95197 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.73■□□□□ 0.11
RTN3O95197 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.73■□□□□ 0.11
RTN3O95197 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.73■□□□□ 0.11
RTN3O95197 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.73■□□□□ 0.11
RTN3O95197 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RTN3O95197 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.73■□□□□ 0.11
RTN3O95197 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.73■□□□□ 0.11
RTN3O95197 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.73■□□□□ 0.11
RTN3O95197 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.73■□□□□ 0.11
RTN3O95197 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RTN3O95197 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.73■□□□□ 0.11
RTN3O95197 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RTN3O95197 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.73■□□□□ 0.11
RTN3O95197 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 AC011840.2-201ENST00000563063 1520 ntBASIC15.73■□□□□ 0.11
RTN3O95197 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RTN3O95197 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 AC023090.2-201ENST00000625182 2110 ntBASIC15.73■□□□□ 0.11
RTN3O95197 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.73■□□□□ 0.11
RTN3O95197 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
RTN3O95197 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN3O95197 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.72■□□□□ 0.11
RTN3O95197 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
RTN3O95197 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.72■□□□□ 0.11
RTN3O95197 AC041040.2-201ENST00000622926 2899 ntBASIC15.72■□□□□ 0.11
RTN3O95197 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RTN3O95197 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.72■□□□□ 0.11
RTN3O95197 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.72■□□□□ 0.11
RTN3O95197 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.72■□□□□ 0.11
RTN3O95197 HIST2H2BB-201ENST00000449108 381 ntBASIC15.72■□□□□ 0.11
RTN3O95197 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.72■□□□□ 0.11
RTN3O95197 FAM8A2P-201ENST00000528813 1142 ntBASIC15.72■□□□□ 0.11
RTN3O95197 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RTN3O95197 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 AC002472.3-201ENST00000640124 621 ntBASIC15.72■□□□□ 0.11
RTN3O95197 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RTN3O95197 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.72■□□□□ 0.11
RTN3O95197 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RTN3O95197 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RTN3O95197 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
RTN3O95197 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN3O95197 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.71■□□□□ 0.11
RTN3O95197 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.71■□□□□ 0.11
RTN3O95197 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.71■□□□□ 0.11
RTN3O95197 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RTN3O95197 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms