Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.15□□□□□ -0.14
SCN2BO60939 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.15□□□□□ -0.14
SCN2BO60939 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.15□□□□□ -0.14
SCN2BO60939 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.15□□□□□ -0.14
SCN2BO60939 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.15□□□□□ -0.14
SCN2BO60939 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.15□□□□□ -0.14
SCN2BO60939 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.15□□□□□ -0.14
SCN2BO60939 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SCN2BO60939 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.15□□□□□ -0.14
SCN2BO60939 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.15□□□□□ -0.14
SCN2BO60939 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 AC008761.3-201ENST00000624803 892 ntBASIC14.15□□□□□ -0.14
SCN2BO60939 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SCN2BO60939 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SCN2BO60939 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.15□□□□□ -0.14
SCN2BO60939 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 BEND3P1-201ENST00000421591 1944 ntBASIC14.15□□□□□ -0.14
SCN2BO60939 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SCN2BO60939 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.15□□□□□ -0.14
SCN2BO60939 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.15□□□□□ -0.14
SCN2BO60939 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.15□□□□□ -0.14
SCN2BO60939 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SCN2BO60939 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SCN2BO60939 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
SCN2BO60939 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.15□□□□□ -0.15
SCN2BO60939 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SCN2BO60939 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.14□□□□□ -0.15
SCN2BO60939 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SCN2BO60939 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.14□□□□□ -0.15
SCN2BO60939 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.14□□□□□ -0.15
SCN2BO60939 TLE1P1-201ENST00000422965 589 ntBASIC14.14□□□□□ -0.15
SCN2BO60939 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.14□□□□□ -0.15
SCN2BO60939 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.14□□□□□ -0.15
SCN2BO60939 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.14□□□□□ -0.15
SCN2BO60939 AC104596.2-201ENST00000512793 793 ntBASIC14.14□□□□□ -0.15
SCN2BO60939 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SCN2BO60939 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.14□□□□□ -0.15
SCN2BO60939 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.14□□□□□ -0.15
SCN2BO60939 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.14□□□□□ -0.15
SCN2BO60939 AC004466.1-201ENST00000599515 1080 ntBASIC14.14□□□□□ -0.15
SCN2BO60939 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.14□□□□□ -0.15
SCN2BO60939 TMEM261P1-201ENST00000604899 340 ntBASIC14.14□□□□□ -0.15
SCN2BO60939 AC005252.2-201ENST00000624630 1141 ntBASIC14.14□□□□□ -0.15
SCN2BO60939 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.14□□□□□ -0.15
SCN2BO60939 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.14□□□□□ -0.15
SCN2BO60939 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 AC016397.2-201ENST00000624848 1985 ntBASIC14.14□□□□□ -0.15
SCN2BO60939 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.14□□□□□ -0.15
SCN2BO60939 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.14□□□□□ -0.15
SCN2BO60939 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SCN2BO60939 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN2BO60939 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
SCN2BO60939 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SCN2BO60939 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SCN2BO60939 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SCN2BO60939 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
SCN2BO60939 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN2BO60939 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms