Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 CD8B2-202ENST00000417670 633 ntBASIC14.03□□□□□ -0.16
PRAMEF2O60811 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 AC245100.3-201ENST00000441281 285 ntBASIC14.03□□□□□ -0.16
PRAMEF2O60811 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 AC006453.4-201ENST00000636949 1252 ntBASIC14.03□□□□□ -0.16
PRAMEF2O60811 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PRAMEF2O60811 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF2O60811 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PRAMEF2O60811 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PRAMEF2O60811 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.02□□□□□ -0.16
PRAMEF2O60811 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PRAMEF2O60811 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PRAMEF2O60811 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PRAMEF2O60811 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PRAMEF2O60811 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PRAMEF2O60811 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PRAMEF2O60811 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PRAMEF2O60811 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PRAMEF2O60811 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PRAMEF2O60811 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.02□□□□□ -0.16
PRAMEF2O60811 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PRAMEF2O60811 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PRAMEF2O60811 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PRAMEF2O60811 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PRAMEF2O60811 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PRAMEF2O60811 TPM3P8-201ENST00000330554 643 ntBASIC14.02□□□□□ -0.17
PRAMEF2O60811 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 MIR1202-201ENST00000408529 83 ntBASIC14.02□□□□□ -0.17
PRAMEF2O60811 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 Z93015.1-201ENST00000451718 390 ntBASIC14.02□□□□□ -0.17
PRAMEF2O60811 AL590640.2-201ENST00000457038 527 ntBASIC14.02□□□□□ -0.17
PRAMEF2O60811 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 ENPP7P14-201ENST00000621765 1040 ntBASIC14.02□□□□□ -0.17
PRAMEF2O60811 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRAMEF2O60811 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRAMEF2O60811 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRAMEF2O60811 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PRAMEF2O60811 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRAMEF2O60811 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRAMEF2O60811 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PRAMEF2O60811 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRAMEF2O60811 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.02□□□□□ -0.17
PRAMEF2O60811 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRAMEF2O60811 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRAMEF2O60811 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRAMEF2O60811 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRAMEF2O60811 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRAMEF2O60811 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.01□□□□□ -0.17
PRAMEF2O60811 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PRAMEF2O60811 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRAMEF2O60811 CICP23-201ENST00000605013 2741 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms