Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 AC092135.3-201ENST00000624151 1846 ntBASIC14.63□□□□□ -0.07
CDC7O00311 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC7O00311 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC7O00311 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC7O00311 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC7O00311 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 AL928921.2-201ENST00000641325 2442 ntBASIC14.63□□□□□ -0.07
CDC7O00311 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDC7O00311 AC020910.5-201ENST00000623668 1865 ntBASIC14.63□□□□□ -0.07
CDC7O00311 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CDC7O00311 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.63□□□□□ -0.07
CDC7O00311 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CDC7O00311 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDC7O00311 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC7O00311 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC7O00311 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDC7O00311 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC7O00311 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDC7O00311 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDC7O00311 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDC7O00311 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CDC7O00311 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.62□□□□□ -0.07
CDC7O00311 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.62□□□□□ -0.07
CDC7O00311 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.62□□□□□ -0.07
CDC7O00311 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.62□□□□□ -0.07
CDC7O00311 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDC7O00311 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.62□□□□□ -0.07
CDC7O00311 POM121L8P-201ENST00000417732 1281 ntBASIC14.62□□□□□ -0.07
CDC7O00311 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 AC245100.3-201ENST00000441281 285 ntBASIC14.62□□□□□ -0.07
CDC7O00311 POM121L9P-203ENST00000441984 1285 ntBASIC14.62□□□□□ -0.07
CDC7O00311 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC7O00311 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.62□□□□□ -0.07
CDC7O00311 AC068587.3-201ENST00000526613 355 ntBASIC14.62□□□□□ -0.07
CDC7O00311 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDC7O00311 AC131206.1-201ENST00000538078 1211 ntBASIC14.62□□□□□ -0.07
CDC7O00311 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.62□□□□□ -0.07
CDC7O00311 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.62□□□□□ -0.07
CDC7O00311 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC7O00311 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CDC7O00311 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDC7O00311 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.62□□□□□ -0.07
CDC7O00311 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDC7O00311 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC7O00311 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC7O00311 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 AL138709.1-201ENST00000614840 1693 ntBASIC14.61□□□□□ -0.07
CDC7O00311 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 AC012617.1-204ENST00000586340 2305 ntBASIC14.61□□□□□ -0.07
CDC7O00311 AC136759.1-202ENST00000530858 2194 ntBASIC14.61□□□□□ -0.07
CDC7O00311 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDC7O00311 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CDC7O00311 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.61□□□□□ -0.07
CDC7O00311 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 AC006504.5-208ENST00000588784 2401 ntBASIC14.61□□□□□ -0.07
CDC7O00311 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC7O00311 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
CDC7O00311 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDC7O00311 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC7O00311 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.61□□□□□ -0.07
CDC7O00311 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms