Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 LINC01115-203ENST00000606068 577 ntBASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 AC055717.3-201ENST00000622967 595 ntBASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 AC084121.4-201ENST00000641598 221 ntBASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 AF228730.8-201ENST00000642140 221 ntBASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 KRT8P24-201ENST00000560290 1559 ntBASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 IL9RP2-201ENST00000423948 1312 ntBASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 AL360270.3-201ENST00000609118 1348 ntBASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
MEIS3P1A6NDR6 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
MEIS3P1A6NDR6 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
MEIS3P1A6NDR6 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
MEIS3P1A6NDR6 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.83□□□□□ -0.35
MEIS3P1A6NDR6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.83□□□□□ -0.35
MEIS3P1A6NDR6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
MEIS3P1A6NDR6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.83□□□□□ -0.35
MEIS3P1A6NDR6 ZNF259P1-201ENST00000407656 1365 ntBASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 AC111170.3-201ENST00000624282 2464 ntBASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 YBX2P1-201ENST00000394192 760 ntBASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 AC015922.1-201ENST00000421102 1152 ntBASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 AL450487.1-201ENST00000426799 995 ntBASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 LINC00628-201ENST00000628516 1289 ntBASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MEIS3P1A6NDR6 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms