Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 AC245884.6-201ENST00000515672 1067 ntBASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 RHOQP1-201ENST00000555758 579 ntBASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 AC009955.4-201ENST00000597192 544 ntBASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 AC106872.11-201ENST00000605838 421 ntBASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 MROH4P-201ENST00000431302 1578 ntBASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTDP1Q9Y5B0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 AC003102.2-201ENST00000589195 1469 ntBASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 REXO1L2P-201ENST00000425429 2069 ntBASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 AC010141.1-201ENST00000411585 623 ntBASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 AC012441.2-201ENST00000444843 739 ntBASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 AC008805.1-201ENST00000590892 364 ntBASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 AC009884.2-201ENST00000603110 324 ntBASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 AC026740.1-201ENST00000607068 791 ntBASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 AC090164.2-201ENST00000611487 516 ntBASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 AP001505.2-201ENST00000616815 443 ntBASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 AL805961.1-203ENST00000641078 1258 ntBASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 AC138627.1-207ENST00000641560 1006 ntBASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 TUBBP5-203ENST00000508529 1334 ntBASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTDP1Q9Y5B0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.17■□□□□ 0.34
CTDP1Q9Y5B0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms