Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC5Q9UQL6 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC5Q9UQL6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC5Q9UQL6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC5Q9UQL6 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 GOLGA2P4-201ENST00000441462 777 ntBASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 RPSAP36-202ENST00000494591 1261 ntBASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 FAM8A2P-201ENST00000528813 1142 ntBASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 AL023803.2-201ENST00000620080 638 ntBASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC5Q9UQL6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 AC018529.2-202ENST00000611482 3087 ntBASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 HSPB1P2-201ENST00000448722 546 ntBASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HDAC5Q9UQL6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms