Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP4E1Q9UPM8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.47■□□□□ 0.07
AP4E1Q9UPM8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP4E1Q9UPM8 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
AP4E1Q9UPM8 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.47■□□□□ 0.07
AP4E1Q9UPM8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.47■□□□□ 0.07
AP4E1Q9UPM8 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP4E1Q9UPM8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
AP4E1Q9UPM8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 AC026748.1-201ENST00000624349 3251 ntBASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 AP000593.2-201ENST00000542775 1433 ntBASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 CNN2P8-201ENST00000421872 913 ntBASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 GAPDHP21-201ENST00000450301 1010 ntBASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 AC078819.1-201ENST00000547454 765 ntBASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 AC012085.1-201ENST00000548270 765 ntBASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 OR10B1P-201ENST00000601666 907 ntBASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 AC138951.2-201ENST00000623455 1161 ntBASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 AGGF1P1-201ENST00000509500 2073 ntBASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.46■□□□□ 0.07
AP4E1Q9UPM8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
AP4E1Q9UPM8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
AP4E1Q9UPM8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
AP4E1Q9UPM8 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
AP4E1Q9UPM8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
AP4E1Q9UPM8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 MRPL37P1-201ENST00000592451 1337 ntBASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 RN7SKP175-201ENST00000408472 289 ntBASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 FAM8A4P-201ENST00000435433 1213 ntBASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 CROCCP4-201ENST00000457096 498 ntBASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 AP003171.2-201ENST00000528208 925 ntBASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.45■□□□□ 0.06
AP4E1Q9UPM8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms