Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 CICP12-201ENST00000455801 843 ntBASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 AC022748.3-201ENST00000621828 275 ntBASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 AL136172.1-201ENST00000598590 1394 ntBASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.22■□□□□ 0.35
GPCPD1Q9NPB8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 AC244394.1-201ENST00000435000 1665 ntBASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 AC104073.2-201ENST00000453737 312 ntBASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 AC244452.3-201ENST00000636814 210 ntBASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPCPD1Q9NPB8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GPCPD1Q9NPB8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.21■□□□□ 0.34
GPCPD1Q9NPB8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
GPCPD1Q9NPB8 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.21■□□□□ 0.34
GPCPD1Q9NPB8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GPCPD1Q9NPB8 AC018442.1-201ENST00000421439 2061 ntBASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 AL161772.1-201ENST00000610494 4412 ntBASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 PUDPP3-201ENST00000445368 636 ntBASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 AKR7A2P1-201ENST00000460134 915 ntBASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 AC091804.1-201ENST00000486888 567 ntBASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 HIST2H2BC-201ENST00000498492 580 ntBASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 AC132192.2-201ENST00000596206 1147 ntBASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GPCPD1Q9NPB8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms