Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 AC068760.1-201ENST00000493579 1953 ntBASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SMIM3Q9BZL3 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 HCG4B-203ENST00000450128 991 ntBASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 LINC01711-201ENST00000598340 967 ntBASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 AC025580.3-201ENST00000617932 1424 ntBASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 AL031008.1-201ENST00000619963 541 ntBASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 AC018665.1-201ENST00000622927 1362 ntBASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 AL358472.4-201ENST00000633140 710 ntBASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 AC066615.1-201ENST00000640911 628 ntBASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM3Q9BZL3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 BCAR1-209ENST00000546196 1340 ntBASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.23□□□□□ -0.45
SMIM3Q9BZL3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms