Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 TERF1P3-201ENST00000505638 1227 ntBASIC15.78■□□□□ 0.12
TRIM11Q96F44 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 AC190387.1-201ENST00000551683 408 ntBASIC15.78■□□□□ 0.12
TRIM11Q96F44 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM11Q96F44 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM11Q96F44 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM11Q96F44 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM11Q96F44 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.77■□□□□ 0.12
TRIM11Q96F44 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM11Q96F44 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.77■□□□□ 0.12
TRIM11Q96F44 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM11Q96F44 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.77■□□□□ 0.12
TRIM11Q96F44 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM11Q96F44 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM11Q96F44 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM11Q96F44 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.77■□□□□ 0.12
TRIM11Q96F44 AC012441.1-201ENST00000446669 685 ntBASIC15.77■□□□□ 0.12
TRIM11Q96F44 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRIM11Q96F44 GCOM2-201ENST00000509133 1104 ntBASIC15.77■□□□□ 0.12
TRIM11Q96F44 PTP4A1P2-201ENST00000546033 454 ntBASIC15.77■□□□□ 0.12
TRIM11Q96F44 WASH4P-201ENST00000564273 1246 ntBASIC15.77■□□□□ 0.12
TRIM11Q96F44 MIR4745-201ENST00000577608 62 ntBASIC15.77■□□□□ 0.12
TRIM11Q96F44 RN7SL48P-201ENST00000579283 293 ntBASIC15.77■□□□□ 0.12
TRIM11Q96F44 AC138761.1-201ENST00000584393 385 ntBASIC15.77■□□□□ 0.12
TRIM11Q96F44 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.77■□□□□ 0.12
TRIM11Q96F44 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM11Q96F44 AC138696.2-201ENST00000607376 223 ntBASIC15.77■□□□□ 0.12
TRIM11Q96F44 MIR6074-201ENST00000612054 107 ntBASIC15.77■□□□□ 0.12
TRIM11Q96F44 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM11Q96F44 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM11Q96F44 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM11Q96F44 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.77■□□□□ 0.11
TRIM11Q96F44 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM11Q96F44 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM11Q96F44 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM11Q96F44 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM11Q96F44 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
TRIM11Q96F44 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM11Q96F44 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM11Q96F44 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM11Q96F44 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TRIM11Q96F44 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM11Q96F44 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 AC136759.1-202ENST00000530858 2194 ntBASIC15.76■□□□□ 0.11
TRIM11Q96F44 MYADML-201ENST00000474610 2147 ntBASIC15.76■□□□□ 0.11
TRIM11Q96F44 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 BAATP1-201ENST00000412284 1225 ntBASIC15.76■□□□□ 0.11
TRIM11Q96F44 ACTG1P3-201ENST00000431775 1114 ntBASIC15.76■□□□□ 0.11
TRIM11Q96F44 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 MESTP3-201ENST00000503460 968 ntBASIC15.76■□□□□ 0.11
TRIM11Q96F44 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.76■□□□□ 0.11
TRIM11Q96F44 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms