Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.29□□□□□ -0.28
RFT1Q96AA3 RPL37AP1-201ENST00000412502 279 ntBASIC13.29□□□□□ -0.28
RFT1Q96AA3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.29□□□□□ -0.28
RFT1Q96AA3 SERBP1P3-201ENST00000459980 809 ntBASIC13.29□□□□□ -0.28
RFT1Q96AA3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 LINC01115-203ENST00000606068 577 ntBASIC13.29□□□□□ -0.28
RFT1Q96AA3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 AL033527.5-202ENST00000641632 1098 ntBASIC13.29□□□□□ -0.28
RFT1Q96AA3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
RFT1Q96AA3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RFT1Q96AA3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.28□□□□□ -0.28
RFT1Q96AA3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RFT1Q96AA3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms