Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
AP3S1Q92572 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.17□□□□□ -0.3
AP3S1Q92572 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 BCAR1-209ENST00000546196 1340 ntBASIC13.17□□□□□ -0.3
AP3S1Q92572 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.17□□□□□ -0.3
AP3S1Q92572 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
AP3S1Q92572 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 REXO1L1P-201ENST00000379010 6598 ntBASIC13.17□□□□□ -0.3
AP3S1Q92572 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.17□□□□□ -0.3
AP3S1Q92572 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.17□□□□□ -0.3
AP3S1Q92572 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 AC018712.1-201ENST00000455767 687 ntBASIC13.17□□□□□ -0.3
AP3S1Q92572 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.17□□□□□ -0.3
AP3S1Q92572 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
AP3S1Q92572 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
AP3S1Q92572 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.17□□□□□ -0.3
AP3S1Q92572 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.17□□□□□ -0.3
AP3S1Q92572 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
AP3S1Q92572 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 AC090643.2-201ENST00000623442 2029 ntBASIC13.17□□□□□ -0.3
AP3S1Q92572 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AP3S1Q92572 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
AP3S1Q92572 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
AP3S1Q92572 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
AP3S1Q92572 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
AP3S1Q92572 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.16□□□□□ -0.3
AP3S1Q92572 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.16□□□□□ -0.3
AP3S1Q92572 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.16□□□□□ -0.3
AP3S1Q92572 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.16□□□□□ -0.3
AP3S1Q92572 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.16□□□□□ -0.3
AP3S1Q92572 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.16□□□□□ -0.3
AP3S1Q92572 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.16□□□□□ -0.3
AP3S1Q92572 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
AP3S1Q92572 CICP16-201ENST00000502609 2813 ntBASIC13.16□□□□□ -0.3
AP3S1Q92572 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.16□□□□□ -0.3
AP3S1Q92572 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AP3S1Q92572 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.16□□□□□ -0.3
AP3S1Q92572 HNRNPDP1-201ENST00000439535 754 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms