Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 E2F3P2-201ENST00000447755 1422 ntBASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 IMP3P2-201ENST00000489760 475 ntBASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 AC106794.1-201ENST00000506935 792 ntBASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 AC100827.2-201ENST00000563214 1194 ntBASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 AC016629.1-201ENST00000596579 586 ntBASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 AC091544.8-201ENST00000619490 361 ntBASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 PKD1P5-201ENST00000532415 10291 ntBASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 AL138725.1-201ENST00000407347 1314 ntBASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 AC010141.1-201ENST00000411585 623 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 AL008707.1-201ENST00000422498 534 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 RN7SL769P-201ENST00000469386 295 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 RN7SL11P-201ENST00000471305 293 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 AC245884.6-201ENST00000515672 1067 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 RN7SL163P-201ENST00000583100 276 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 AC005324.6-201ENST00000587972 613 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 AC026740.1-201ENST00000607068 791 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 CU633904.3-201ENST00000624042 1029 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 AC015967.2-201ENST00000624092 234 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 AC006435.4-201ENST00000625037 234 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 AL356737.1-201ENST00000634391 234 ntBASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms