Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 AC078875.1-201ENST00000431907 724 ntBASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 MIR3619-201ENST00000579667 83 ntBASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 AC133540.1-201ENST00000620845 1019 ntBASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD1Q8NHV4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NEDD1Q8NHV4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NEDD1Q8NHV4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NEDD1Q8NHV4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NEDD1Q8NHV4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.21■□□□□ 0.34
NEDD1Q8NHV4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NEDD1Q8NHV4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.21■□□□□ 0.34
NEDD1Q8NHV4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 IGHJ2P-201ENST00000454480 60 ntBASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.2■□□□□ 0.34
NEDD1Q8NHV4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 MIR769-201ENST00000390225 118 ntBASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 SLC25A24P2-201ENST00000415059 510 ntBASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 ACTG1P2-201ENST00000415776 1125 ntBASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 ACTG1P11-201ENST00000425411 1125 ntBASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 RCC2P8-201ENST00000502779 1035 ntBASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 AC023824.1-201ENST00000562945 2975 ntBASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 TNRC18P2-201ENST00000417666 2714 ntBASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.19■□□□□ 0.34
NEDD1Q8NHV4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NEDD1Q8NHV4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms