Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 AC004987.2-201ENST00000395959 1148 ntBASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 ATP6V0CP3-201ENST00000417255 467 ntBASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 SART3-203ENST00000546611 1184 ntBASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KCNIP4Q6PIL6 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.61□□□□□ -0.55
KCNIP4Q6PIL6 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms