Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 AC012618.1-201ENST00000461223 412 ntBASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 NUP210P1-202ENST00000504322 710 ntBASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 AC009779.1-201ENST00000551138 283 ntBASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC62Q6P9F0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC62Q6P9F0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC62Q6P9F0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC62Q6P9F0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC62Q6P9F0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC62Q6P9F0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC62Q6P9F0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 AL157791.1-201ENST00000553667 1699 ntBASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 AC091046.1-201ENST00000331871 207 ntBASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 RN7SKP214-201ENST00000364208 315 ntBASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 CICP12-201ENST00000455801 843 ntBASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 SCARNA21-201ENST00000517026 139 ntBASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 AC079336.7-201ENST00000623428 1078 ntBASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC62Q6P9F0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC62Q6P9F0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms