Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.37□□□□□ -0.11
RFTN2Q52LD8 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 KLF2P2-201ENST00000416807 1039 ntBASIC14.37□□□□□ -0.11
RFTN2Q52LD8 EIF3FP3-201ENST00000434851 1086 ntBASIC14.37□□□□□ -0.11
RFTN2Q52LD8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 AC055876.2-201ENST00000531834 546 ntBASIC14.37□□□□□ -0.11
RFTN2Q52LD8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 AC012617.1-204ENST00000586340 2305 ntBASIC14.37□□□□□ -0.11
RFTN2Q52LD8 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFTN2Q52LD8 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 AC098850.1-201ENST00000419919 790 ntBASIC14.36□□□□□ -0.11
RFTN2Q52LD8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 UGT1A2P-201ENST00000454886 866 ntBASIC14.36□□□□□ -0.11
RFTN2Q52LD8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 RFPL4AP1-201ENST00000530883 850 ntBASIC14.36□□□□□ -0.11
RFTN2Q52LD8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 AC092552.1-201ENST00000547243 906 ntBASIC14.36□□□□□ -0.11
RFTN2Q52LD8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 AC093726.1-201ENST00000608064 963 ntBASIC14.36□□□□□ -0.11
RFTN2Q52LD8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 AC008761.3-201ENST00000624803 892 ntBASIC14.36□□□□□ -0.11
RFTN2Q52LD8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFTN2Q52LD8 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms