Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 RARRES2P5-201ENST00000564013 466 ntBASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 AC092337.1-201ENST00000568699 1129 ntBASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 AC074044.1-201ENST00000609673 707 ntBASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 PDIA3P1-201ENST00000471856 1510 ntBASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 AC117489.1-201ENST00000625169 3217 ntBASIC13.17□□□□□ -0.3
CHRFAM7AQ494W8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 AL162726.2-201ENST00000438986 1017 ntBASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 AC099548.2-209ENST00000480264 625 ntBASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 RNA5SP412-201ENST00000516234 123 ntBASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 SLC25A47P1-201ENST00000531577 414 ntBASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
CHRFAM7AQ494W8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms