Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC19.28■□□□□ 0.68
COL16A1Q07092 AC106782.5-201ENST00000616011 337 ntBASIC19.28■□□□□ 0.68
COL16A1Q07092 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
COL16A1Q07092 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.27■□□□□ 0.68
COL16A1Q07092 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL16A1Q07092 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
COL16A1Q07092 LILRP2-202ENST00000413572 1383 ntBASIC19.27■□□□□ 0.68
COL16A1Q07092 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
COL16A1Q07092 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL16A1Q07092 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL16A1Q07092 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.27■□□□□ 0.68
COL16A1Q07092 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL16A1Q07092 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.27■□□□□ 0.68
COL16A1Q07092 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
COL16A1Q07092 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC19.27■□□□□ 0.68
COL16A1Q07092 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC19.27■□□□□ 0.68
COL16A1Q07092 HMGA1P2-201ENST00000430198 324 ntBASIC19.27■□□□□ 0.68
COL16A1Q07092 AL954722.1-201ENST00000431238 259 ntBASIC19.27■□□□□ 0.68
COL16A1Q07092 EEF1DP2-201ENST00000433698 843 ntBASIC19.27■□□□□ 0.68
COL16A1Q07092 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC19.27■□□□□ 0.68
COL16A1Q07092 RN7SL672P-201ENST00000474091 317 ntBASIC19.27■□□□□ 0.68
COL16A1Q07092 AC100858.1-201ENST00000514059 1228 ntBASIC19.27■□□□□ 0.68
COL16A1Q07092 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC19.27■□□□□ 0.68
COL16A1Q07092 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC19.27■□□□□ 0.68
COL16A1Q07092 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC19.27■□□□□ 0.68
COL16A1Q07092 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL16A1Q07092 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL16A1Q07092 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
COL16A1Q07092 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.27■□□□□ 0.68
COL16A1Q07092 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL16A1Q07092 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL16A1Q07092 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL16A1Q07092 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL16A1Q07092 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.27■□□□□ 0.68
COL16A1Q07092 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.27■□□□□ 0.68
COL16A1Q07092 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL16A1Q07092 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL16A1Q07092 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
COL16A1Q07092 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.27■□□□□ 0.67
COL16A1Q07092 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.27■□□□□ 0.67
COL16A1Q07092 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL16A1Q07092 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL16A1Q07092 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
COL16A1Q07092 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
COL16A1Q07092 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
COL16A1Q07092 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 MIR1226-201ENST00000408658 75 ntBASIC19.26■□□□□ 0.67
COL16A1Q07092 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC19.26■□□□□ 0.67
COL16A1Q07092 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC19.26■□□□□ 0.67
COL16A1Q07092 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 VDAC1P11-201ENST00000458323 852 ntBASIC19.26■□□□□ 0.67
COL16A1Q07092 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC19.26■□□□□ 0.67
COL16A1Q07092 TMA16-204ENST00000508268 608 ntTSL 2 BASIC19.26■□□□□ 0.67
COL16A1Q07092 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC19.26■□□□□ 0.67
COL16A1Q07092 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC19.26■□□□□ 0.67
COL16A1Q07092 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC19.26■□□□□ 0.67
COL16A1Q07092 AP006248.1-201ENST00000610471 67 ntBASIC19.26■□□□□ 0.67
COL16A1Q07092 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 RPL13AP3-202ENST00000494676 1473 ntBASIC19.26■□□□□ 0.67
COL16A1Q07092 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL16A1Q07092 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC19.26■□□□□ 0.67
COL16A1Q07092 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL16A1Q07092 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC19.25■□□□□ 0.67
COL16A1Q07092 CDKN2A-AS1-201ENST00000441769 823 ntBASIC19.25■□□□□ 0.67
COL16A1Q07092 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC19.25■□□□□ 0.67
COL16A1Q07092 BAK1P2-201ENST00000532665 631 ntBASIC19.25■□□□□ 0.67
COL16A1Q07092 TPST2P1-201ENST00000564073 1102 ntBASIC19.25■□□□□ 0.67
COL16A1Q07092 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC19.25■□□□□ 0.67
COL16A1Q07092 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC19.25■□□□□ 0.67
COL16A1Q07092 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC19.25■□□□□ 0.67
COL16A1Q07092 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC19.25■□□□□ 0.67
COL16A1Q07092 AC009041.4-201ENST00000620075 638 ntBASIC19.25■□□□□ 0.67
COL16A1Q07092 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC19.25■□□□□ 0.67
COL16A1Q07092 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COL16A1Q07092 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL16A1Q07092 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.25■□□□□ 0.67
COL16A1Q07092 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms