Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 AC092933.1-201ENST00000393644 945 ntBASIC13.03□□□□□ -0.32
HIST1H3AP68431 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 AC015936.2-201ENST00000593177 259 ntBASIC13.03□□□□□ -0.32
HIST1H3AP68431 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 AL136172.1-201ENST00000598590 1394 ntBASIC13.03□□□□□ -0.32
HIST1H3AP68431 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 AP000593.2-201ENST00000542775 1433 ntBASIC13.03□□□□□ -0.32
HIST1H3AP68431 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 AC011840.2-201ENST00000563063 1520 ntBASIC13.03□□□□□ -0.32
HIST1H3AP68431 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H3AP68431 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HIST1H3AP68431 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.02□□□□□ -0.32
HIST1H3AP68431 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H3AP68431 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H3AP68431 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
HIST1H3AP68431 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H3AP68431 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
HIST1H3AP68431 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H3AP68431 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.02□□□□□ -0.32
HIST1H3AP68431 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 AL355864.2-201ENST00000447420 863 ntBASIC13.02□□□□□ -0.33
HIST1H3AP68431 MYADML-201ENST00000474610 2147 ntBASIC13.02□□□□□ -0.33
HIST1H3AP68431 USP32P1-208ENST00000506594 1164 ntBASIC13.02□□□□□ -0.33
HIST1H3AP68431 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 AL596325.1-201ENST00000563991 1082 ntBASIC13.02□□□□□ -0.33
HIST1H3AP68431 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H3AP68431 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H3AP68431 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms