Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SKP1P63208 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SKP1P63208 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.19□□□□□ -0.14
SKP1P63208 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.19□□□□□ -0.14
SKP1P63208 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SKP1P63208 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 AL138725.1-201ENST00000407347 1314 ntBASIC14.18□□□□□ -0.14
SKP1P63208 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.18□□□□□ -0.14
SKP1P63208 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SKP1P63208 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.18□□□□□ -0.14
SKP1P63208 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SKP1P63208 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.18□□□□□ -0.14
SKP1P63208 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.18□□□□□ -0.14
SKP1P63208 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.18□□□□□ -0.14
SKP1P63208 CSF2RBP1-201ENST00000447905 391 ntBASIC14.18□□□□□ -0.14
SKP1P63208 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 RNA5SP412-201ENST00000516234 123 ntBASIC14.18□□□□□ -0.14
SKP1P63208 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SKP1P63208 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.18□□□□□ -0.14
SKP1P63208 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.18□□□□□ -0.14
SKP1P63208 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.18□□□□□ -0.14
SKP1P63208 MIR6775-201ENST00000617557 69 ntBASIC14.18□□□□□ -0.14
SKP1P63208 MIR6752-201ENST00000618442 71 ntBASIC14.18□□□□□ -0.14
SKP1P63208 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.18□□□□□ -0.14
SKP1P63208 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 LINC01101-201ENST00000622953 1884 ntBASIC14.18□□□□□ -0.14
SKP1P63208 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.18□□□□□ -0.14
SKP1P63208 AC003102.2-201ENST00000589195 1469 ntBASIC14.18□□□□□ -0.14
SKP1P63208 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.18□□□□□ -0.14
SKP1P63208 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SKP1P63208 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.17□□□□□ -0.14
SKP1P63208 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
SKP1P63208 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SKP1P63208 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.17□□□□□ -0.14
SKP1P63208 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SKP1P63208 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SKP1P63208 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.17□□□□□ -0.14
SKP1P63208 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.17□□□□□ -0.14
SKP1P63208 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SKP1P63208 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.17□□□□□ -0.14
SKP1P63208 HLA-V-201ENST00000429037 534 ntBASIC14.17□□□□□ -0.14
SKP1P63208 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.17□□□□□ -0.14
SKP1P63208 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SKP1P63208 ALG3P1-201ENST00000508806 1114 ntBASIC14.17□□□□□ -0.14
SKP1P63208 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.17□□□□□ -0.14
SKP1P63208 DUX4L45-201ENST00000566406 1057 ntBASIC14.17□□□□□ -0.14
SKP1P63208 PEG13-201ENST00000631594 5667 ntBASIC14.17□□□□□ -0.14
SKP1P63208 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.17□□□□□ -0.14
SKP1P63208 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.17□□□□□ -0.14
SKP1P63208 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SKP1P63208 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SKP1P63208 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.16□□□□□ -0.14
SKP1P63208 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SKP1P63208 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms