Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.04□□□□□ -0.16
TRA2BP62995 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRA2BP62995 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRA2BP62995 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRA2BP62995 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRA2BP62995 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRA2BP62995 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRA2BP62995 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 AC152010.1-201ENST00000415779 2006 ntBASIC14.03□□□□□ -0.16
TRA2BP62995 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRA2BP62995 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.03□□□□□ -0.16
TRA2BP62995 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 FAM197Y7-201ENST00000432892 766 ntBASIC14.03□□□□□ -0.16
TRA2BP62995 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.03□□□□□ -0.16
TRA2BP62995 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.03□□□□□ -0.16
TRA2BP62995 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 KRT90P-201ENST00000549264 1064 ntBASIC14.03□□□□□ -0.16
TRA2BP62995 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.03□□□□□ -0.16
TRA2BP62995 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRA2BP62995 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.03□□□□□ -0.16
TRA2BP62995 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.03□□□□□ -0.16
TRA2BP62995 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRA2BP62995 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.03□□□□□ -0.16
TRA2BP62995 KHSRPP1-201ENST00000427983 1768 ntBASIC14.03□□□□□ -0.16
TRA2BP62995 C8orf49-201ENST00000525043 1968 ntBASIC14.03□□□□□ -0.16
TRA2BP62995 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.03□□□□□ -0.16
TRA2BP62995 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TRA2BP62995 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRA2BP62995 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.02□□□□□ -0.16
TRA2BP62995 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.02□□□□□ -0.16
TRA2BP62995 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TRA2BP62995 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRA2BP62995 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.02□□□□□ -0.16
TRA2BP62995 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRA2BP62995 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.02□□□□□ -0.16
TRA2BP62995 AC006001.1-201ENST00000325130 474 ntBASIC14.02□□□□□ -0.17
TRA2BP62995 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.02□□□□□ -0.17
TRA2BP62995 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.02□□□□□ -0.17
TRA2BP62995 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRA2BP62995 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRA2BP62995 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRA2BP62995 TMEM14DP-201ENST00000422205 345 ntBASIC14.02□□□□□ -0.17
TRA2BP62995 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.02□□□□□ -0.17
TRA2BP62995 KRT17P7-201ENST00000451704 1104 ntBASIC14.02□□□□□ -0.17
TRA2BP62995 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
TRA2BP62995 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRA2BP62995 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.02□□□□□ -0.17
TRA2BP62995 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms