Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.34□□□□□ -0.11
EPHA4P54764 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.34□□□□□ -0.11
EPHA4P54764 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
EPHA4P54764 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.34□□□□□ -0.11
EPHA4P54764 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.34□□□□□ -0.11
EPHA4P54764 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
EPHA4P54764 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EPHA4P54764 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
EPHA4P54764 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
EPHA4P54764 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.33□□□□□ -0.11
EPHA4P54764 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
EPHA4P54764 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
EPHA4P54764 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EPHA4P54764 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EPHA4P54764 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.33□□□□□ -0.12
EPHA4P54764 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
EPHA4P54764 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
EPHA4P54764 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.33□□□□□ -0.12
EPHA4P54764 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.33□□□□□ -0.12
EPHA4P54764 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
EPHA4P54764 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.33□□□□□ -0.12
EPHA4P54764 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.33□□□□□ -0.12
EPHA4P54764 MIR769-201ENST00000390225 118 ntBASIC14.33□□□□□ -0.12
EPHA4P54764 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.33□□□□□ -0.12
EPHA4P54764 PUDPP3-201ENST00000445368 636 ntBASIC14.33□□□□□ -0.12
EPHA4P54764 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 MARK2P5-201ENST00000507649 634 ntBASIC14.33□□□□□ -0.12
EPHA4P54764 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.33□□□□□ -0.12
EPHA4P54764 AC022217.1-201ENST00000521069 738 ntBASIC14.33□□□□□ -0.12
EPHA4P54764 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.33□□□□□ -0.12
EPHA4P54764 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.33□□□□□ -0.12
EPHA4P54764 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
EPHA4P54764 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
EPHA4P54764 AC009884.2-201ENST00000603110 324 ntBASIC14.33□□□□□ -0.12
EPHA4P54764 AC068587.8-201ENST00000641239 219 ntBASIC14.33□□□□□ -0.12
EPHA4P54764 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.33□□□□□ -0.12
EPHA4P54764 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.33□□□□□ -0.12
EPHA4P54764 AC023157.3-201ENST00000619086 2088 ntBASIC14.33□□□□□ -0.12
EPHA4P54764 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.33□□□□□ -0.12
EPHA4P54764 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
EPHA4P54764 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
EPHA4P54764 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.33□□□□□ -0.12
EPHA4P54764 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
EPHA4P54764 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
EPHA4P54764 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
EPHA4P54764 AC067930.6-201ENST00000623257 4947 ntBASIC14.33□□□□□ -0.12
EPHA4P54764 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.33□□□□□ -0.12
EPHA4P54764 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA4P54764 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.32□□□□□ -0.12
EPHA4P54764 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
EPHA4P54764 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
EPHA4P54764 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.32□□□□□ -0.12
EPHA4P54764 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
EPHA4P54764 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.32□□□□□ -0.12
EPHA4P54764 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
EPHA4P54764 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.32□□□□□ -0.12
EPHA4P54764 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.32□□□□□ -0.12
EPHA4P54764 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
EPHA4P54764 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 AL662890.1-201ENST00000396818 632 ntBASIC14.32□□□□□ -0.12
EPHA4P54764 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.32□□□□□ -0.12
EPHA4P54764 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 IGHJ2P-201ENST00000454480 60 ntBASIC14.32□□□□□ -0.12
EPHA4P54764 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
EPHA4P54764 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms