Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
ATP1B3P54709 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.02□□□□□ -0.33
ATP1B3P54709 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.02□□□□□ -0.33
ATP1B3P54709 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.02□□□□□ -0.33
ATP1B3P54709 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ATP1B3P54709 AL138799.1-201ENST00000448213 1675 ntBASIC13.02□□□□□ -0.33
ATP1B3P54709 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ATP1B3P54709 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.02□□□□□ -0.33
ATP1B3P54709 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 AC113367.3-201ENST00000508316 1912 ntBASIC13.01□□□□□ -0.33
ATP1B3P54709 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ATP1B3P54709 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ATP1B3P54709 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 AC089987.1-201ENST00000551654 2209 ntBASIC13.01□□□□□ -0.33
ATP1B3P54709 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ATP1B3P54709 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ATP1B3P54709 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.01□□□□□ -0.33
ATP1B3P54709 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ATP1B3P54709 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.01□□□□□ -0.33
ATP1B3P54709 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
ATP1B3P54709 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ATP1B3P54709 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.01□□□□□ -0.33
ATP1B3P54709 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.01□□□□□ -0.33
ATP1B3P54709 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.01□□□□□ -0.33
ATP1B3P54709 MEP1AP4-201ENST00000423244 1087 ntBASIC13.01□□□□□ -0.33
ATP1B3P54709 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.01□□□□□ -0.33
ATP1B3P54709 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.01□□□□□ -0.33
ATP1B3P54709 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.01□□□□□ -0.33
ATP1B3P54709 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 TPRX2P-201ENST00000535362 881 ntBASIC13.01□□□□□ -0.33
ATP1B3P54709 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
ATP1B3P54709 AL049840.4-201ENST00000602422 811 ntBASIC13.01□□□□□ -0.33
ATP1B3P54709 AC107373.2-201ENST00000607735 490 ntBASIC13.01□□□□□ -0.33
ATP1B3P54709 AL391069.4-201ENST00000609583 481 ntBASIC13.01□□□□□ -0.33
ATP1B3P54709 AC008738.7-201ENST00000609744 511 ntBASIC13.01□□□□□ -0.33
ATP1B3P54709 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.01□□□□□ -0.33
ATP1B3P54709 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 AC004840.1-201ENST00000636359 365 ntBASIC13.01□□□□□ -0.33
ATP1B3P54709 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ATP1B3P54709 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ATP1B3P54709 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 AC093525.8-201ENST00000624099 1342 ntBASIC13.01□□□□□ -0.33
ATP1B3P54709 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.01□□□□□ -0.33
ATP1B3P54709 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.01□□□□□ -0.33
ATP1B3P54709 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ATP1B3P54709 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ATP1B3P54709 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.01□□□□□ -0.33
ATP1B3P54709 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
ATP1B3P54709 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ATP1B3P54709 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.01□□□□□ -0.33
ATP1B3P54709 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
ATP1B3P54709 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATP1B3P54709 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ATP1B3P54709 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ATP1B3P54709 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ATP1B3P54709 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP1B3P54709 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ATP1B3P54709 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP1B3P54709 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13□□□□□ -0.33
ATP1B3P54709 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ATP1B3P54709 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13□□□□□ -0.33
ATP1B3P54709 DGCR9-201ENST00000609630 2415 ntBASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms