Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.46■□□□□ 0.39
NEDD4P46934 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.46■□□□□ 0.39
NEDD4P46934 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NEDD4P46934 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
NEDD4P46934 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 AC139712.1-201ENST00000378256 1875 ntBASIC17.46■□□□□ 0.39
NEDD4P46934 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 INTS4P1-203ENST00000641008 3683 ntBASIC17.46■□□□□ 0.39
NEDD4P46934 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
NEDD4P46934 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NEDD4P46934 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.46■□□□□ 0.38
NEDD4P46934 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.46■□□□□ 0.38
NEDD4P46934 AL591846.1-201ENST00000451736 433 ntBASIC17.46■□□□□ 0.38
NEDD4P46934 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.46■□□□□ 0.38
NEDD4P46934 AC108725.1-201ENST00000495472 409 ntBASIC17.46■□□□□ 0.38
NEDD4P46934 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
NEDD4P46934 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.46■□□□□ 0.38
NEDD4P46934 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NEDD4P46934 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.46■□□□□ 0.38
NEDD4P46934 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.46■□□□□ 0.38
NEDD4P46934 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.46■□□□□ 0.38
NEDD4P46934 AC103988.2-201ENST00000561804 725 ntBASIC17.46■□□□□ 0.38
NEDD4P46934 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.46■□□□□ 0.38
NEDD4P46934 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.46■□□□□ 0.38
NEDD4P46934 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
NEDD4P46934 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.46■□□□□ 0.38
NEDD4P46934 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
NEDD4P46934 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NEDD4P46934 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.45■□□□□ 0.38
NEDD4P46934 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.45■□□□□ 0.38
NEDD4P46934 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.45■□□□□ 0.38
NEDD4P46934 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NEDD4P46934 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 FAM86MP-201ENST00000340703 885 ntBASIC17.45■□□□□ 0.38
NEDD4P46934 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 MIR663B-201ENST00000408361 115 ntBASIC17.45■□□□□ 0.38
NEDD4P46934 BTBD6P1-201ENST00000412176 1267 ntBASIC17.45■□□□□ 0.38
NEDD4P46934 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.45■□□□□ 0.38
NEDD4P46934 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.45■□□□□ 0.38
NEDD4P46934 KLF2P1-201ENST00000447438 1042 ntBASIC17.45■□□□□ 0.38
NEDD4P46934 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.45■□□□□ 0.38
NEDD4P46934 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.45■□□□□ 0.38
NEDD4P46934 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.45■□□□□ 0.38
NEDD4P46934 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.45■□□□□ 0.38
NEDD4P46934 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD4P46934 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.45■□□□□ 0.38
NEDD4P46934 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NEDD4P46934 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.44■□□□□ 0.38
NEDD4P46934 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.44■□□□□ 0.38
NEDD4P46934 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.44■□□□□ 0.38
NEDD4P46934 AGGF1P1-201ENST00000509500 2073 ntBASIC17.44■□□□□ 0.38
NEDD4P46934 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 AC015688.4-201ENST00000580780 1647 ntBASIC17.44■□□□□ 0.38
NEDD4P46934 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD4P46934 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD4P46934 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD4P46934 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.44■□□□□ 0.38
NEDD4P46934 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD4P46934 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.44■□□□□ 0.38
NEDD4P46934 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD4P46934 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.44■□□□□ 0.38
NEDD4P46934 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.44■□□□□ 0.38
NEDD4P46934 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms