Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
KDM5CP41229 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KDM5CP41229 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC21.66■■□□□ 1.06
KDM5CP41229 FUCA1P1-201ENST00000374476 1351 ntBASIC21.66■■□□□ 1.06
KDM5CP41229 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KDM5CP41229 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KDM5CP41229 AC019109.1-201ENST00000401725 1874 ntBASIC21.66■■□□□ 1.06
KDM5CP41229 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KDM5CP41229 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
KDM5CP41229 MIR1301-201ENST00000408518 82 ntBASIC21.65■■□□□ 1.06
KDM5CP41229 NME6-208ENST00000435684 599 ntTSL 2 BASIC21.65■■□□□ 1.06
KDM5CP41229 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDM5CP41229 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KDM5CP41229 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KDM5CP41229 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDM5CP41229 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDM5CP41229 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
KDM5CP41229 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC21.65■■□□□ 1.06
KDM5CP41229 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDM5CP41229 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
KDM5CP41229 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDM5CP41229 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDM5CP41229 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDM5CP41229 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
KDM5CP41229 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
KDM5CP41229 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDM5CP41229 AC067931.2-201ENST00000623655 2003 ntBASIC21.65■■□□□ 1.06
KDM5CP41229 GEMIN8P4-201ENST00000380526 729 ntBASIC21.65■■□□□ 1.06
KDM5CP41229 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KDM5CP41229 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KDM5CP41229 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDM5CP41229 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC21.65■■□□□ 1.06
KDM5CP41229 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC21.65■■□□□ 1.06
KDM5CP41229 F11R-204ENST00000537746 1245 ntTSL 2 BASIC21.65■■□□□ 1.06
KDM5CP41229 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC21.65■■□□□ 1.06
KDM5CP41229 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KDM5CP41229 FES-204ENST00000414248 2327 ntTSL 2 BASIC21.65■■□□□ 1.06
KDM5CP41229 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
KDM5CP41229 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
KDM5CP41229 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KDM5CP41229 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.06
KDM5CP41229 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
KDM5CP41229 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
KDM5CP41229 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
KDM5CP41229 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
KDM5CP41229 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
KDM5CP41229 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KDM5CP41229 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC21.64■■□□□ 1.06
KDM5CP41229 AL109809.1-201ENST00000418979 1367 ntBASIC21.64■■□□□ 1.05
KDM5CP41229 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KDM5CP41229 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KDM5CP41229 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
KDM5CP41229 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KDM5CP41229 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KDM5CP41229 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KDM5CP41229 AC106827.1-201ENST00000366454 431 ntBASIC21.64■■□□□ 1.05
KDM5CP41229 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.05
KDM5CP41229 LINC00265-2P-201ENST00000413372 782 ntBASIC21.64■■□□□ 1.05
KDM5CP41229 AC025186.1-201ENST00000478174 870 ntBASIC21.64■■□□□ 1.05
KDM5CP41229 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC21.64■■□□□ 1.05
KDM5CP41229 NT5C-204ENST00000578337 582 ntTSL 2 BASIC21.64■■□□□ 1.05
KDM5CP41229 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC21.64■■□□□ 1.05
KDM5CP41229 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC21.64■■□□□ 1.05
KDM5CP41229 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
KDM5CP41229 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KDM5CP41229 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
KDM5CP41229 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KDM5CP41229 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC21.64■■□□□ 1.05
KDM5CP41229 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KDM5CP41229 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
KDM5CP41229 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KDM5CP41229 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
KDM5CP41229 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
KDM5CP41229 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC21.63■■□□□ 1.05
KDM5CP41229 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDM5CP41229 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDM5CP41229 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC21.63■■□□□ 1.05
KDM5CP41229 BPIFB5P-201ENST00000457066 1099 ntBASIC21.63■■□□□ 1.05
KDM5CP41229 ALG1L3P-201ENST00000503331 765 ntBASIC21.63■■□□□ 1.05
KDM5CP41229 AP005212.2-201ENST00000584979 510 ntBASIC21.63■■□□□ 1.05
KDM5CP41229 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC21.63■■□□□ 1.05
KDM5CP41229 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KDM5CP41229 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KDM5CP41229 AC006486.2-201ENST00000624246 2199 ntBASIC21.63■■□□□ 1.05
KDM5CP41229 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDM5CP41229 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC21.63■■□□□ 1.05
KDM5CP41229 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDM5CP41229 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC21.63■■□□□ 1.05
KDM5CP41229 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC21.63■■□□□ 1.05
KDM5CP41229 AC008741.2-201ENST00000612792 3115 ntBASIC21.63■■□□□ 1.05
KDM5CP41229 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KDM5CP41229 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KDM5CP41229 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDM5CP41229 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
KDM5CP41229 PHB-210ENST00000511832 1509 ntTSL 2 BASIC21.62■■□□□ 1.05
KDM5CP41229 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KDM5CP41229 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KDM5CP41229 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC21.62■■□□□ 1.05
KDM5CP41229 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
KDM5CP41229 RN7SL767P-201ENST00000493013 295 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms