Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.27■□□□□ 0.36
ERCC3P19447 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.27■□□□□ 0.36
ERCC3P19447 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC3P19447 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC3P19447 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.27■□□□□ 0.36
ERCC3P19447 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.27■□□□□ 0.36
ERCC3P19447 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC3P19447 MIR4783-201ENST00000580343 82 ntBASIC17.27■□□□□ 0.36
ERCC3P19447 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
ERCC3P19447 AL136301.1-201ENST00000615830 422 ntBASIC17.27■□□□□ 0.36
ERCC3P19447 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC3P19447 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC3P19447 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC3P19447 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERCC3P19447 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.27■□□□□ 0.36
ERCC3P19447 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.27■□□□□ 0.35
ERCC3P19447 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERCC3P19447 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.27■□□□□ 0.35
ERCC3P19447 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERCC3P19447 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERCC3P19447 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
ERCC3P19447 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERCC3P19447 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERCC3P19447 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERCC3P19447 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ERCC3P19447 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERCC3P19447 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERCC3P19447 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERCC3P19447 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERCC3P19447 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.27■□□□□ 0.35
ERCC3P19447 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
ERCC3P19447 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERCC3P19447 INE2-201ENST00000630399 1874 ntBASIC17.27■□□□□ 0.35
ERCC3P19447 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
ERCC3P19447 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ERCC3P19447 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.26■□□□□ 0.35
ERCC3P19447 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.26■□□□□ 0.35
ERCC3P19447 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.26■□□□□ 0.35
ERCC3P19447 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ERCC3P19447 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 AC091046.1-201ENST00000331871 207 ntBASIC17.26■□□□□ 0.35
ERCC3P19447 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ERCC3P19447 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 RN7SKP175-201ENST00000408472 289 ntBASIC17.26■□□□□ 0.35
ERCC3P19447 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.26■□□□□ 0.35
ERCC3P19447 AC104073.2-201ENST00000453737 312 ntBASIC17.26■□□□□ 0.35
ERCC3P19447 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 AC106794.1-201ENST00000506935 792 ntBASIC17.26■□□□□ 0.35
ERCC3P19447 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.26■□□□□ 0.35
ERCC3P19447 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ERCC3P19447 AC013355.1-201ENST00000562625 723 ntBASIC17.26■□□□□ 0.35
ERCC3P19447 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.26■□□□□ 0.35
ERCC3P19447 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 AC026740.1-201ENST00000607068 791 ntBASIC17.26■□□□□ 0.35
ERCC3P19447 AL162426.1-201ENST00000624141 743 ntBASIC17.26■□□□□ 0.35
ERCC3P19447 AC004923.1-202ENST00000642106 209 ntBASIC17.26■□□□□ 0.35
ERCC3P19447 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.26■□□□□ 0.35
ERCC3P19447 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ERCC3P19447 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
ERCC3P19447 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 AL137783.1-201ENST00000623494 1896 ntBASIC17.26■□□□□ 0.35
ERCC3P19447 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.26■□□□□ 0.35
ERCC3P19447 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.26■□□□□ 0.35
ERCC3P19447 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ERCC3P19447 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.26■□□□□ 0.35
ERCC3P19447 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERCC3P19447 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ERCC3P19447 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ERCC3P19447 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ERCC3P19447 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.25■□□□□ 0.35
ERCC3P19447 AC004899.1-201ENST00000424687 1714 ntBASIC17.25■□□□□ 0.35
ERCC3P19447 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC3P19447 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ERCC3P19447 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.25■□□□□ 0.35
ERCC3P19447 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.25■□□□□ 0.35
ERCC3P19447 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.25■□□□□ 0.35
ERCC3P19447 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.25■□□□□ 0.35
ERCC3P19447 HINT2P1-201ENST00000419438 481 ntBASIC17.25■□□□□ 0.35
ERCC3P19447 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms